RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	VPS29	Q9UBQ0	182 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	GIMAP2	Q9UG22	337 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CIDEB	Q9UHD4	219 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	OAZ3	Q9UMX2	235 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	RUVBL1	Q9Y265	456 aa	Known RBP	5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PLEKHM1	Q9Y4G2	1056 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CCL27	Q9Y4X3	112 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	GPR45	Q9Y5Y3	372 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PTGDR2	Q9Y5Y4	395 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CFAP20	Q9Y6A4	193 aa	Known RBP	5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	DGKB	Q9Y6T7	804 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ANKRD12	Q6UB98	2062 aa		5.06	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ASCC3	Q8N3C0	2202 aa	Known RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SPTY2D1-AS1	A0A0U1RR47	76 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325		A0A1W2PP18	115 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	KRT87P	A6NCN2	255 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ANKDD1B	A6NHY2	528 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CCDC154	A6NI56	674 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	MEI4	A8MW99	385 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FOXE1	O00358	373 aa	Predicted RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	NR5A2	O00482	541 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CFLAR	O15519	480 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CBFA2T3	O75081	653 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	STAMBP	O95630	424 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	IL6	P05231	212 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ZNF888	P0CJ79	500 aa	Predicted RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	G6PD	P11413	515 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	MTHFD1	P11586	935 aa	Known RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	MYF5	P13349	255 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	F3	P13726	295 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	XRCC1	P18887	633 aa	Predicted RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	JAK1	P23458	1154 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	HRH2	P25021	359 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PTX3	P26022	381 aa	Predicted RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CD38	P28907	300 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SHMT2	P34897	504 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	GRK3	P35626	688 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PIK3CB	P42338	1070 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ASMT	P46597	345 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CCR8	P51685	355 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	NEK2	P51955	445 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	DIO3	P55073	304 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	NME5	P56597	212 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CLDN8	P56748	225 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PSME3	P61289	254 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	UFM1	P61960	85 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	HMGCS1	Q01581	520 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PRDX1	Q06830	199 aa	Known RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FOXM1	Q08050	763 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ACSM2A	Q08AH3	577 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	TBL3	Q12788	808 aa	Known RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	DDX39B	Q13838	428 aa	Known RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CLCA4	Q14CN2	919 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ALG11	Q2TAA5	492 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	TRMT5	Q32P41	509 aa	Known RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	RFTN2	Q52LD8	501 aa	Predicted RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SPIN4	Q56A73	249 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CATSPERE	Q5SY80	951 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ACSM2B	Q68CK6	577 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	REP15	Q6BDI9	236 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PGM2L1	Q6PCE3	622 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	VHLL	Q6RSH7	139 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CYP20A1	Q6UW02	462 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SUSD1	Q6UWL2	747 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ZNF627	Q7L945	461 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FUNDC1	Q8IVP5	155 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	RBM12B	Q8IXT5	1001 aa	Known RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	LAS2	Q8IYD9	372 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FBXW8	Q8N3Y1	598 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	LIX1	Q8N485	282 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	STPG3	Q8N7X2	389 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	OR7G3	Q8NG95	312 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	WDR20	Q8TBZ3	569 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	RLN3	Q8WXF3	142 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	STARD8	Q92502	1023 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	STMN2	Q93045	179 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SLC22A18	Q96BI1	424 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PDXP	Q96GD0	296 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	IL17F	Q96PD4	163 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	OR14A2	Q96R54	314 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CDRT15	Q96T59	188 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	HBEGF	Q99075	208 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	NPAS2	Q99743	824 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	AIF1L	Q9BQI0	150 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CENPK	Q9BS16	269 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	C1orf50	Q9BV19	199 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	WDR41	Q9HAD4	459 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PRDM8	Q9NQV8	689 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FARSB	Q9NSD9	589 aa	Known RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ASH2L	Q9UBL3	628 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	BAIAP2L1	Q9UHR4	511 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	LEF1	Q9UJU2	399 aa	Predicted RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PLAGL1	Q9UM63	463 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SNX7	Q9UNH6	387 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CA5B	Q9Y2D0	317 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	WDR37	Q9Y2I8	494 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	C15orf41	Q9Y2V0	281 aa		5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	POLR3H	Q9Y535	204 aa	Predicted RBP	5.05	□□□□□ -1.6
HMGXB4-208	ENST00000498325	F5	P12259	2224 aa		5.05	□□□□□ -1.6

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