RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 OR4C11Q6IEV9 310 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 ZCCHC23Q6ZST2 131 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 FRMD7Q6ZUT3 714 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 TMEM52Q8NDY8 209 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 C7orf57Q8NEG2 295 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 NR4A3Q92570 626 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 CDK15Q96Q40 435 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 TAAR6Q96RI8 345 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 MTERF1Q99551 399 aaKnown RBP14.32□□□□□ -0.12
NUP50-219ENST00000497960 SLX1AQ9BQ83 275 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 GSTO2Q9H4Y5 243 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 DMRT3Q9NQL9 472 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 KCMF1Q9P0J7 381 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 SLC5A6Q9Y289 635 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 PCDHGB6Q9Y5F9 930 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 DIDO1Q9BTC0 2240 aaKnown RBP14.31□□□□□ -0.12
NUP50-219ENST00000497960 TRBV11-1A0A0K0K1C0 115 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 WDR91A4D1P6 747 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 FCHO1O14526 889 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 ATP8B1O43520 1251 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 CLDN9O95484 217 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 CPN2P22792 545 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 MLF1P58340 268 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 SLAMF1Q13291 335 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 SERTAD2Q14140 314 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 MPP2Q14168 576 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 ELAVL1Q15717 326 aaKnown RBP14.31□□□□□ -0.12
NUP50-219ENST00000497960 ZNF324BQ6AW86 544 aaPredicted RBP14.31□□□□□ -0.12
NUP50-219ENST00000497960 TTC19Q6DKK2 380 aaPredicted RBP14.31□□□□□ -0.12
NUP50-219ENST00000497960 SPINK14Q6IE38 97 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 GPRIN3Q6ZVF9 776 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 MILR1Q7Z6M3 343 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 NUDCD3Q8IVD9 361 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 TMEM132CQ8N3T6 1108 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 L3MBTL4Q8NA19 623 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 TMEM178AQ8NBL3 297 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 MDS2Q8NDY4 140 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 OR4F6Q8NGB9 312 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 VMP1Q96GC9 406 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 SIGLEC12Q96PQ1 595 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 PSMG3-AS1Q96PY0 264 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 ZNF382Q96SR6 550 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 MAPKAP1Q9BPZ7 522 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 NTMT1Q9BV86 223 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 GATA5Q9BWX5 397 aaPredicted RBP14.31□□□□□ -0.12
NUP50-219ENST00000497960 ALOXE3Q9BYJ1 711 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 KLHL1Q9NR64 748 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 MS4A12Q9NXJ0 267 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 LRFN1Q9P244 771 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 FBXW2Q9UKT8 454 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 PPIEQ9UNP9 301 aaKnown RBP14.31□□□□□ -0.12
NUP50-219ENST00000497960 RNF11Q9Y3C5 154 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 CLDN16Q9Y5I7 305 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 CLCA3PQ9Y6N3 262 aa14.31□□□□□ -0.12
NUP50-219ENST00000497960 TGFBR3LH3BV60 316 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 OR4F21O95013 312 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 DHRS4L1P0CG22 281 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 GP1BBP13224 206 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 TNNI3P19429 210 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 TPP2P29144 1249 aaPredicted RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 PPP2R1BP30154 601 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 TLX1P31314 330 aaPredicted RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 CYB561P49447 251 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 ST13P50502 369 aaKnown RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 ARFIP1P53367 373 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 RPS13P62277 151 aaKnown RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 ZRSR2Q15696 482 aaKnown RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 GGTA1PQ4G0N0 100 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 RNF175Q8N4F7 328 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 FAM98AQ8NCA5 519 aaKnown RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 APCDD1LQ8NCL9 501 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 DAZLQ92904 295 aaKnown RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 NCLNQ969V3 563 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 SORBS1Q9BX66 1292 aaKnown RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 MID1IP1Q9NPA3 183 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 VTI1BQ9UEU0 232 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 TRPS1Q9UHF7 1281 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 PHF11Q9UIL8 331 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 ERRFI1Q9UJM3 462 aaPredicted RBP14.3□□□□□ -0.12
NUP50-219ENST00000497960 OSGIN2Q9Y236 505 aa14.3□□□□□ -0.12
NUP50-219ENST00000497960 FOXE1O00358 373 aaPredicted RBP14.29□□□□□ -0.12
NUP50-219ENST00000497960 PLPP1O14494 284 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 BIRC5O15392 142 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 LDB3O75112 727 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 CRCPO75575 148 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 ZFAND5O76080 213 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 SP1P08047 785 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 HMOX2P30519 316 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 SLC18A1P54219 525 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 PKNOX1P55347 436 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 PPP2R2AP63151 447 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 CUL3Q13618 768 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 CHI3L2Q15782 390 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 SLC25A25Q6KCM7 469 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 LETMD1Q6P1Q0 360 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 GFRALQ6UXV0 394 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 GPR180Q86V85 440 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 ZCCHC7Q8N3Z6 543 aaKnown RBP14.29□□□□□ -0.12
NUP50-219ENST00000497960 OR14A16Q8NHC5 309 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 AGAP11Q8TF27 550 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms