RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 A0A1B0GTH9 108 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 E9PLN8 166 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 POC1B-GALNT4F8VUJ3 575 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 HS6ST1O60243 411 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 FGF17O60258 216 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 SMIM24O75264 130 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 SIX3O95343 332 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 GPR75O95800 540 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 ALOX15P16050 662 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 CNTFP26441 200 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 PTGER1P34995 402 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 PTGS2P35354 604 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 BSGP35613 385 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 ARL1P40616 181 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 RFC3P40938 356 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 SOX3P41225 446 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 NEK2P51955 445 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 CCNG1P51959 295 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 GPR85P60893 370 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 ADORA2A-AS1P86434 159 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 HSF1Q00613 529 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 TSNAXIP1Q2TAA8 658 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF750Q32MQ0 723 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 PIGGQ5H8A4 983 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 TECRLQ5HYJ1 363 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 UBAP2Q5T6F2 1119 aaKnown RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 LGSNQ5TDP6 509 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 C18orf63Q68DL7 685 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 TTC19Q6DKK2 380 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 OPN5Q6U736 354 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 CYP20A1Q6UW02 462 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 RTL4Q6ZR62 310 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 RGS9BPQ6ZS82 235 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 PTGR2Q8N8N7 351 aaPredicted RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 NOA1Q8NC60 698 aaKnown RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 WDR20Q8TBZ3 569 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF721Q8TF20 911 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 AGAP11Q8TF27 550 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 SREK1Q8WXA9 508 aaKnown RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 ISL2Q96A47 359 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 PPWD1Q96BP3 646 aaKnown RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 MTFMTQ96DP5 389 aaKnown RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 PHF21BQ96EK2 531 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 ART5Q96L15 291 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 SGCZQ96LD1 299 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 PAFAH2Q99487 392 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 SERPINI1Q99574 410 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 VKORC1Q9BQB6 163 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 DDX31Q9H8H2 851 aaKnown RBP11.82□□□□□ -0.52
PTPRF-214ENST00000496043 WDR41Q9HAD4 459 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.82□□□□□ -0.524e-7■□□□□ 9.9
PTPRF-214ENST00000496043 ASB4Q9Y574 426 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 UNC79Q9P2D8 2635 aa11.82□□□□□ -0.52
PTPRF-214ENST00000496043 IQANK1A0A1B0GTG1 560 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 STX16-NPEPL1H3BU86 382 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 STX16O14662 325 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 ZNHIT1O43257 154 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 CDC40O60508 579 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 PDE9AO76083 593 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 FAM58BPP0C7Q3 252 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 GRNP28799 593 aaKnown RBP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 MAGEA12P43365 314 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 HNRNPH2P55795 449 aaKnown RBP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 PPIAP62937 165 aaKnown RBP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 PLIN5Q00G26 463 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 TNFRSF17Q02223 184 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 PLGLB1Q02325 96 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 FOLH1Q04609 750 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 MPEG1Q2M385 716 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 CMPK2Q5EBM0 449 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 MRM1Q6IN84 353 aaKnown RBP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 FGD2Q7Z6J4 655 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 MILR1Q7Z6M3 343 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 TICAM1Q8IUC6 712 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 LURAP1LQ8IV03 231 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 CHERPQ8IWX8 916 aaKnown RBP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 OR2M7Q8NG81 312 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 OR52N2Q8NGI0 321 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 UHMK1Q8TAS1 419 aaKnown RBP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 FAM57AQ8TBR7 257 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 PHF10Q8WUB8 498 aaKnown RBP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 FAM173AQ9BQD7 235 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 PELOQ9BRX2 385 aaKnown RBP11.81□□□□□ -0.52
PTPRF-214ENST00000496043 NTMT1Q9BV86 223 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 DEFB127Q9H1M4 99 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 DEPPQ9NTK1 212 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 AHSPQ9NZD4 102 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF180Q9UJW8 692 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 PPT2Q9UMR5 302 aa11.81□□□□□ -0.52
PTPRF-214ENST00000496043 A0A087WUV0 522 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 A0A0A6YYD5 115 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 A0A1W2PR48 441 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 TRIM49D1C9J1S8 452 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 KIF2AO00139 706 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-214ENST00000496043 ACOT7O00154 380 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 OR7A17O14581 309 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 OR10H2O60403 315 aa11.8□□□□□ -0.52
PTPRF-214ENST00000496043 EEDO75530 441 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms