RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 KHDRBS2Q5VWX1 349 aaKnown RBP21.48■■□□□ 1.03
COL27A1-208ENST00000494780 ISCA2Q86U28 154 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 OR7G3Q8NG95 312 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 UBTD2Q8WUN7 234 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 SENP5Q96HI0 755 aaPredicted RBP21.48■■□□□ 1.03
COL27A1-208ENST00000494780 DGAT2Q96PD7 388 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 NMRAL1Q9HBL8 299 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 MS4A12Q9NXJ0 267 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 OPTCQ9UBM4 332 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 ADGRE2Q9UHX3 823 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 C2CD3Q4AC94 2353 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 AKAP9Q99996 3911 aa21.48■■□□□ 1.03
COL27A1-208ENST00000494780 K7EPI3 171 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 DYRK3O43781 588 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 SUSD5O60279 629 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 SH3BGRLO75368 114 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 HOXD4P09016 255 aaPredicted RBP21.47■■□□□ 1.03
COL27A1-208ENST00000494780 CCL3P10147 92 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 DNASE1L1P49184 302 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 ASPHQ12797 758 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 SLC10A1Q14973 349 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 DEPDC1Q5TB30 811 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 OR4C11Q6IEV9 310 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 ZNF585AQ6P3V2 769 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 B3GNT6Q6ZMB0 384 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 RAPH1Q70E73 1250 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 CTAGE3PQ8IX95 158 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 ART5Q96L15 291 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 TTYH2Q9BSA4 534 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 GRPEL1Q9HAV7 217 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 SLC24A3Q9HC58 644 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 TUBA8Q9NY65 449 aaPredicted RBP21.47■■□□□ 1.03
COL27A1-208ENST00000494780 TNFRSF10DQ9UBN6 386 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 KCNN3Q9UGI6 736 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 ATG4BQ9Y4P1 393 aa21.47■■□□□ 1.03
COL27A1-208ENST00000494780 INTS1Q8N201 2190 aaKnown RBP21.47■■□□□ 1.03
COL27A1-208ENST00000494780 ATP6AP2A0A1C7CYW4 349 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 SAP18O00422 153 aaKnown RBP21.46■■□□□ 1.03
COL27A1-208ENST00000494780 KERAO60938 352 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 ATP6AP2O75787 350 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 IGKV3-11P04433 115 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 MAN2A2P49641 1150 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 GPX6P59796 221 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 TBL3Q12788 808 aaKnown RBP21.46■■□□□ 1.03
COL27A1-208ENST00000494780 DLG1Q12959 904 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 SLAMF1Q13291 335 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 ZNF791Q3KP31 576 aaPredicted RBP21.46■■□□□ 1.03
COL27A1-208ENST00000494780 GRHL2Q6ISB3 625 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 MAATS1Q7Z4T9 603 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 TBC1D1Q86TI0 1168 aaPredicted RBP21.46■■□□□ 1.03
COL27A1-208ENST00000494780 OR4N5Q8IXE1 308 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 SLC15A4Q8N697 577 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 OR10Q1Q8NGQ4 319 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 SLC22A8Q8TCC7 542 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 TANKQ92844 425 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 RBM18Q96H35 190 aaKnown RBP21.46■■□□□ 1.03
COL27A1-208ENST00000494780 ATOH8Q96SQ7 321 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 OR51B5Q9H339 312 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 RPF2Q9H7B2 306 aaKnown RBP21.46■■□□□ 1.03
COL27A1-208ENST00000494780 GRHL1Q9NZI5 618 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 FAM215AQ9Y5M1 114 aa21.46■■□□□ 1.03
COL27A1-208ENST00000494780 SUPT3HB4E1H0 165 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 HCN1O60741 890 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 WDR1O75083 606 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 SUPT3HO75486 399 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 SLC35E2BP0CK96 405 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 GLI4P10075 376 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 EPB42P16452 691 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 CRABP2P29373 138 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 GMPRP36959 345 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 PLIN5Q00G26 463 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 SLC22A10Q63ZE4 541 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 CMC1Q7Z7K0 106 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 C9orf40Q8IXQ3 194 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 CLYBLQ8N0X4 340 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 RGMAQ96B86 450 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 SARAFQ96BY9 339 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 ZNF559Q9BR84 538 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 CENPKQ9BS16 269 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 LDAHQ9H6V9 325 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 SH2D2AQ9NP31 389 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 RYDENQ9NUL5 291 aaKnown RBP21.45■■□□□ 1.02
COL27A1-208ENST00000494780 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.45■■□□□ 1.022e-13■■■□□ 17.9
COL27A1-208ENST00000494780 PHF11Q9UIL8 331 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 ACAD8Q9UKU7 415 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 TSC22D4Q9Y3Q8 395 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.45■■□□□ 1.02
COL27A1-208ENST00000494780 EML6Q6ZMW3 1958 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 CELSR1Q9NYQ6 3014 aa21.45■■□□□ 1.02
COL27A1-208ENST00000494780 UBXN8O00124 270 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 KLK8O60259 260 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 CELA3AP09093 270 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 LTA4HP09960 611 aaKnown RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 TLX1P31314 330 aaPredicted RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 PIK3CBP42338 1070 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 ZFP36L2P47974 494 aaKnown RBP21.44■■□□□ 1.02
COL27A1-208ENST00000494780 RAP1GDS1P52306 607 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 ARFIP1P53367 373 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 FOLH1Q04609 750 aa21.44■■□□□ 1.02
COL27A1-208ENST00000494780 SLMAPQ14BN4 828 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms