RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 PLIN5Q00G26 463 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 FOLH1Q04609 750 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 BTKQ06187 659 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 INPP5JQ15735 1006 aaPredicted RBP14.88□□□□□ -0.03
LIME1-209ENST00000494776 IGFBP7Q16270 282 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 SPDYAQ5MJ70 313 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 LRIG3Q6UXM1 1119 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 RPS19BP1Q86WX3 136 aaKnown RBP14.88□□□□□ -0.03
LIME1-209ENST00000494776 BEST3Q8N1M1 668 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 C1orf52Q8N6N3 182 aaKnown RBP14.88□□□□□ -0.03
LIME1-209ENST00000494776 Q8NA96 180 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 OR14A16Q8NHC5 309 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 NCLNQ969V3 563 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 MECRQ9BV79 373 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 GATA5Q9BWX5 397 aaPredicted RBP14.88□□□□□ -0.03
LIME1-209ENST00000494776 ACPTQ9BZG2 426 aa14.88□□□□□ -0.03
LIME1-209ENST00000494776 TRAV17A0A0B4J275 112 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 OR5H15A6NDH6 313 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 OR10H2O60403 315 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 GPR75O95800 540 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 UROSP10746 265 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 CHN1P15882 459 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 ALOX15P16050 662 aaPredicted RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 PIK3R1P27986 724 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 SERPINB3P29508 390 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 FOXA1P55317 472 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 HMGCS1Q01581 520 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 OC90Q02509 493 aaPredicted RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 KCNC4Q03721 635 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 ACSM2AQ08AH3 577 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 GALNT1Q10472 559 aaPredicted RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 TBL3Q12788 808 aaKnown RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 SPIN4Q56A73 249 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 NDUFAF5Q5TEU4 345 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 ACSM2BQ68CK6 577 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 OR52E8Q6IFG1 317 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 CISD2Q8N5K1 135 aaKnown RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 MORN4Q8NDC4 146 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 THAP3Q8WTV1 239 aaPredicted RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 PTPMT1Q8WUK0 201 aaPredicted RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 CHTF18Q8WVB6 975 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 PPWD1Q96BP3 646 aaKnown RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 UTP23Q9BRU9 249 aaKnown RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 TRMOQ9BU70 441 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 OR8D2Q9GZM6 311 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 RNF32Q9H0A6 362 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 STMN4Q9H169 189 aaPredicted RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 EML4Q9HC35 981 aaKnown RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 KCNK9Q9NPC2 374 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 TEX10Q9NXF1 929 aaPredicted RBP14.87□□□□□ -0.03
LIME1-209ENST00000494776 COPS7AQ9UBW8 275 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 FIS1Q9Y3D6 152 aa14.87□□□□□ -0.03
LIME1-209ENST00000494776 BSNQ9UPA5 3926 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 GNG14A0A1W2PPG7 69 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 GOLGA6L10A6NI86 522 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 WASHC1A8K0Z3 465 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 GABRR3A8MPY1 467 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 FCHO1O14526 889 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 TYROBPO43914 113 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 ZFAND5O76080 213 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 WISP1O95388 367 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 CHEK2O96017 543 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 STT3AP46977 705 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 TNFSF10P50591 281 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 IGLV3-21P80748 117 aaPredicted RBP14.86□□□□□ -0.03
LIME1-209ENST00000494776 PRR30Q53SZ7 412 aaPredicted RBP14.86□□□□□ -0.03
LIME1-209ENST00000494776 CLEC6AQ6EIG7 209 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 EXOC3L1Q86VI1 746 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 ATCAYQ86WG3 371 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 LGI4Q8N135 537 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 APCDD1LQ8NCL9 501 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 PPP1R14CQ8TAE6 165 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 PELOQ9BRX2 385 aaKnown RBP14.86□□□□□ -0.03
LIME1-209ENST00000494776 FAIM2Q9BWQ8 316 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 CLMPQ9H6B4 373 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 RRAGDQ9NQL2 400 aaPredicted RBP14.86□□□□□ -0.03
LIME1-209ENST00000494776 ANKRD10Q9NXR5 420 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 MCM8Q9UJA3 840 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 PCDHGA10Q9Y5H3 936 aa14.86□□□□□ -0.03
LIME1-209ENST00000494776 COPG1Q9Y678 874 aaKnown RBP14.86□□□□□ -0.03
LIME1-209ENST00000494776 C1orf226A1L170 272 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 SERTM1A2A2V5 107 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 AZIN1O14977 448 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 PGRMC2O15173 223 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 PCDH7O60245 1069 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 MAN1A2O60476 641 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 NPHS1O60500 1241 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 VPS4BO75351 444 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 ALDH9A1P49189 494 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 ST13P50502 369 aaKnown RBP14.85□□□□□ -0.03
LIME1-209ENST00000494776 MLF1P58340 268 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 TRA2BP62995 288 aaKnown RBP14.85□□□□□ -0.03
LIME1-209ENST00000494776 FOXK1P85037 733 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 TUBA3CQ13748 450 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 BEND6Q5SZJ8 279 aaPredicted RBP14.85□□□□□ -0.03
LIME1-209ENST00000494776 TUBA3EQ6PEY2 450 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 HSDL2Q6YN16 418 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 ZCCHC23Q6ZST2 131 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 NUDCD3Q8IVD9 361 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 ST13P4Q8IZP2 240 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms