RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ARL10Q8N8L6 244 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 KCT2Q8NC54 265 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 SRFBP1Q8NEF9 429 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 OR4C15Q8NGM1 316 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 ZCCHC10Q8TBK6 192 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 UTP15Q8TED0 518 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 ZFPM2Q8WW38 1151 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 GEMIN6Q8WXD5 167 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 RLN3Q8WXF3 142 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 TM4SF19Q96DZ7 209 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 OR2A5Q96R48 311 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 EPYCQ99645 322 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 FOXQ1Q9C009 403 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 REEP1Q9H902 201 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 FAM118AQ9NWS6 357 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 C3orf18Q9UK00 162 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 PILRAQ9UKJ1 303 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 FBXW2Q9UKT8 454 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 CES1P1Q9UKY3 287 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 ENTPD4Q9Y227 616 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 SAMHD1Q9Y3Z3 626 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 A0A1W2PR77 199 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 GLOD5A6NK44 160 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 OR5K4A6NMS3 321 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 C2orf74A8MZ97 194 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 HMGN4O00479 90 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 AXIN1O15169 862 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PRAMEF10O60809 474 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 GUCY1B2O75343 617 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF217O75362 1048 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 DNAJB5O75953 348 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 BMP10O95393 424 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 WNT1P04628 370 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 SLC35G6P0C7Q6 338 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 SMIM10L1P0DMW3 83 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PVRP15151 417 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 IL7RP16871 459 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PRKACGP22612 351 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PAX7P23759 505 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 RRM2P31350 389 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PTGER1P34995 402 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PRIM2P49643 509 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 NCBP2P52298 156 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLCN6-208ENST00000494028 RAD23AP54725 363 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 NR1H2P55055 460 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PPP1CAP62136 330 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 SELENOWP63302 87 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 TGM3Q08188 693 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 FUT5Q11128 374 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 TP53BP2Q13625 1128 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 UBXN2BQ14CS0 331 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 CEBPEQ15744 281 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF750Q32MQ0 723 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF691Q5VV52 312 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 TTC23Q5W5X9 447 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 C18orf63Q68DL7 685 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 KDM4DQ6B0I6 523 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PTCRAQ6ISU1 281 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-208ENST00000494028 FAHD1Q6P587 224 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 FIGLAQ6QHK4 219 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 C6orf120Q7Z4R8 191 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF605Q86T29 641 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 CYP4Z1Q86W10 505 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 C8orf59Q8N0T1 100 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-208ENST00000494028 CHDHQ8NE62 594 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-208ENST00000494028 GPR32P1Q8NGA4 272 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 MAFAQ8NHW3 353 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-208ENST00000494028 SPPL2AQ8TCT8 520 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 APOBEC4Q8WW27 367 aaKnown RBP10.07□□□□□ -0.8
CLCN6-208ENST00000494028 RSC1A1Q92681 617 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 NRBF2Q96F24 287 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 CNRIP1Q96F85 164 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-208ENST00000494028 SMIM10Q96HG1 83 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 C10orf90Q96M02 699 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 MUS81Q96NY9 551 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 PITX2Q99697 317 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 MAPKAP1Q9BPZ7 522 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 ZCCHC3Q9NUD5 404 aaKnown RBP10.07□□□□□ -0.8
CLCN6-208ENST00000494028 NDUFAF4Q9P032 175 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF451Q9Y4E5 1061 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 ENTPD2Q9Y5L3 495 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 LYVE1Q9Y5Y7 322 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 SCN3AQ9NY46 2000 aa10.07□□□□□ -0.8
CLCN6-208ENST00000494028 SPTBN5Q9NRC6 3674 aaKnown RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 A0A0J9YVX5 310 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 PRAMEF27A3QJZ7 478 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 WASHC1A8K0Z3 465 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 B4DGG1 531 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 E9PQ18 207 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 M0QX08 132 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 BCKDKO14874 412 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 PGRMC2O15173 223 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 VILLO15195 856 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ADAMDEC1O15204 470 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 SH3BP5O60239 455 aa10.06□□□□□ -0.8
CLCN6-208ENST00000494028 ERAL1O75616 437 aaKnown RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 SEC24DO94855 1032 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-208ENST00000494028 TFPTP0C1Z6 253 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms