RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 C1orf226A1L170 272 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 TEX46H3BTG2 121 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SGK494L7N484 410 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 PRAMEF4O60810 478 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SLC25A27O95847 323 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 TRBC1P01850 177 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 TFPIP10646 304 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 DGKAP23743 735 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 BMP8BP34820 402 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 XCR1P46094 333 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 GSTM5P46439 218 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 LIMS1P48059 325 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 HSF2Q03933 536 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 PLA1AQ53H76 456 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 PRAMEF9Q5VWM5 478 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 CASP12Q6UXS9 341 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 MSANTD1Q6ZTZ1 278 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 MOB2Q70IA6 237 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 BMP8AQ7Z5Y6 402 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 LUZP2Q86TE4 346 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SERPINA9Q86WD7 417 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SRFBP1Q8NEF9 429 aaKnown RBP11.15□□□□□ -0.62
HDAC4-210ENST00000493582 OR52I1Q8NGK6 324 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SGTBQ96EQ0 304 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 MTERF1Q99551 399 aaKnown RBP11.15□□□□□ -0.62
HDAC4-210ENST00000493582 MGME1Q9BQP7 344 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 CINPQ9BW66 212 aaPredicted RBP11.15□□□□□ -0.62
HDAC4-210ENST00000493582 LINC00597Q9H2U6 94 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 IFT46Q9NQC8 304 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 FAM120CQ9NX05 1096 aaKnown RBP11.15□□□□□ -0.62
HDAC4-210ENST00000493582 TVP23BQ9NYZ1 205 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 CPNE7Q9UBL6 633 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 FKBP7Q9Y680 259 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 WDR90Q96KV7 1748 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 BRWD3Q6RI45 1802 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SLC30A4O14863 429 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 FZD6O60353 706 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 KCNJ13O60928 360 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 DHFRP00374 187 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SRP9P49458 86 aaKnown RBP11.15□□□□□ -0.62
HDAC4-210ENST00000493582 GPR15P49685 360 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SNRPGP62308 76 aaKnown RBP11.15□□□□□ -0.62
HDAC4-210ENST00000493582 CAMK2DQ13557 499 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 KRT74Q7RTS7 529 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 OR8J2Q8NGG1 315 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 MED18Q9BUE0 208 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
HDAC4-210ENST00000493582 SLC32A1Q9H598 525 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 HCN2Q9UL51 889 aa11.15□□□□□ -0.62
HDAC4-210ENST00000493582 MMP3P08254 477 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ELK1P19419 428 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 DNASE1P24855 282 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 HOXD9P28356 352 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 RPIAP49247 311 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 TPMTP51580 245 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 DCDC1P59894 354 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 BTG1P62324 171 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 BCL2L1Q07817 233 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 RAET1GQ6H3X3 334 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SPATA2LQ8IUW3 424 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 P2RY13Q9BPV8 354 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 PRR14Q9BWN1 585 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SHARPINQ9H0F6 387 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 NT5DC2Q9H857 520 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 EMC7Q9NPA0 242 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 FAM105AQ9NUU6 356 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 TRPM5Q9NZQ8 1165 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 REV1Q9UBZ9 1251 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 RAB23Q9ULC3 237 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 GSTK1Q9Y2Q3 226 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SF3B6Q9Y3B4 125 aaKnown RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 HRH3Q9Y5N1 445 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 CCDC88CQ9P219 2028 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 F8W810 466 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 LGALS8O00214 317 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 FFAR1O14842 300 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SMIM10L2AP0DMW4 78 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SMIM10L2BP0DMW5 78 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 NUP62P37198 522 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 CD79BP40259 229 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 HMGA2P52926 109 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ATP12AP54707 1039 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF33BQ06732 778 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 BAMBIQ13145 260 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SCARB2Q14108 478 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 HEPACAMQ14CZ8 416 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF770Q6IQ21 691 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SHFQ7M4L6 423 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 OR4K1Q8NGD4 311 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 HUS1BQ8NHY5 278 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 CSGALNACT1Q8TDX6 532 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ASIC4Q96FT7 647 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 WBP1Q96G27 269 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SCMH1Q96GD3 660 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ADGRE3Q9BY15 652 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SAP130Q9H0E3 1048 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 OR51J1Q9H342 316 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 TBC1D17Q9HA65 648 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 SDHAF2Q9NX18 166 aa11.14□□□□□ -0.63
HDAC4-210ENST00000493582 ACSL6Q9UKU0 697 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms