RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 NEIL3Q8TAT5 605 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 PAQR8Q8TEZ7 354 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 FAM222BQ8WU58 562 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 ANKRD7Q92527 254 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 MBD6Q96DN6 1003 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 SENP5Q96HI0 755 aaPredicted RBP12.6□□□□□ -0.39
SAMM50-204ENST00000493161 PBKQ96KB5 322 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 JSRP1Q96MG2 331 aaPredicted RBP12.6□□□□□ -0.39
SAMM50-204ENST00000493161 NAT9Q9BTE0 207 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 SORBS1Q9BX66 1292 aaKnown RBP12.6□□□□□ -0.39
SAMM50-204ENST00000493161 ZFP64Q9NPA5 681 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 ASIC3Q9UHC3 531 aa12.6□□□□□ -0.39
SAMM50-204ENST00000493161 PGRMC1O00264 195 aaKnown RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 PIAS1O75925 651 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 IGKV3-11P04433 115 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 EPORP19235 508 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 ATP5A1P25705 553 aaKnown RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 GSTM2P28161 218 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 CEACAM8P31997 349 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 HSPA7P48741 367 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 FNTAP49354 379 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 ASCL1P50553 236 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 AGFG1P52594 562 aaKnown RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 SERTAD2Q14140 314 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 DAZAP2Q15038 168 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 TGFBIQ15582 683 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 ACSF3Q4G176 576 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 STEAP4Q687X5 459 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 KRTAP1-3Q8IUG1 177 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 FBXW8Q8N3Y1 598 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 ACOT4Q8N9L9 421 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 LINC01560Q8TB33 94 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 RNASE6Q93091 150 aaKnown RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 SPACA9Q96E40 222 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 LYRM4Q9HD34 91 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 ACKR4Q9NPB9 350 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 DNAJC11Q9NVH1 559 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 CHCHD2Q9Y6H1 151 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-204ENST00000493161 KIAA1549Q9HCM3 1950 aa12.59□□□□□ -0.39
SAMM50-204ENST00000493161 WASHC1A8K0Z3 465 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 FAM47E-STBD1D6RA91 191 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 SAP18O00422 153 aaKnown RBP12.58□□□□□ -0.4
SAMM50-204ENST00000493161 DVL2O14641 736 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 CLGNO14967 610 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 PRKRAO75569 313 aaKnown RBP12.58□□□□□ -0.4
SAMM50-204ENST00000493161 EPPINO95925 133 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 RAF1P04049 648 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 KCNC1P48547 511 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 ZNF136P52737 540 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 IGLV3-21P80748 117 aaPredicted RBP12.58□□□□□ -0.4
SAMM50-204ENST00000493161 DUSP8Q13202 625 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 RCN2Q14257 317 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 DEFB113Q30KQ7 82 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 FBXL19-AS1Q494R0 122 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 TMEM64Q6YI46 380 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 CAMKMTQ7Z624 323 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 ADAMTSL2Q86TH1 951 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 ANKMY2Q8IV38 441 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 RNF175Q8N4F7 328 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 SNX31Q8N9S9 440 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 FAM13CQ8NE31 585 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 NUBPLQ8TB37 319 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 GRK7Q8WTQ7 553 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 WDR34Q96EX3 536 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 PTCD3Q96EY7 689 aaKnown RBP12.58□□□□□ -0.4
SAMM50-204ENST00000493161 KCNC2Q96PR1 638 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 PITHD1Q9GZP4 211 aaPredicted RBP12.58□□□□□ -0.4
SAMM50-204ENST00000493161 DDX47Q9H0S4 455 aaKnown RBP12.58□□□□□ -0.4
SAMM50-204ENST00000493161 EPB41L4BQ9H329 900 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 EHD1Q9H4M9 534 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 PLEKHF2Q9H8W4 249 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 GPRC5BQ9NZH0 403 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 COPS7AQ9UBW8 275 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 CNOT11Q9UKZ1 510 aaKnown RBP12.58□□□□□ -0.4
SAMM50-204ENST00000493161 BOKQ9UMX3 212 aaPredicted RBP12.58□□□□□ -0.4
SAMM50-204ENST00000493161 PPP2R2CQ9Y2T4 447 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 JRKLQ9Y4A0 524 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 TEX264Q9Y6I9 313 aa12.58□□□□□ -0.4
SAMM50-204ENST00000493161 C15orf38-AP3S2A0A0A6YYH1 394 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 A0A1W2PPR1 153 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 SYNDIG1LA6NDD5 238 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 WISP3O95389 354 aaPredicted RBP12.57□□□□□ -0.4
SAMM50-204ENST00000493161 TGFB1P01137 390 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 CPN2P22792 545 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 HOXC12P31275 282 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 GGT5P36269 586 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 GMPRP36959 345 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 MSH2P43246 934 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 STT3AP46977 705 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 CRYZQ08257 329 aaKnown RBP12.57□□□□□ -0.4
SAMM50-204ENST00000493161 KEAP1Q14145 624 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 OR4D1Q15615 310 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 TMEM198Q66K66 360 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 BICRALQ6AI39 1079 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 CHSY3Q70JA7 882 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 BIVMQ86UB2 503 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 SLC22A8Q8TCC7 542 aa12.57□□□□□ -0.4
SAMM50-204ENST00000493161 ZNF473Q8WTR7 871 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms