RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 SPATA2LQ8IUW3 424 aaPredicted RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 TMEM192Q8IY95 271 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 KRT78Q8N1N4 520 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 HSD17B8Q92506 261 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 PAPOLGQ9BWT3 736 aaKnown RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 NLNQ9BYT8 704 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 CDT1Q9H211 546 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ABCG5Q9H222 651 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 TMEM184CQ9NVA4 438 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 MARCH4Q9P2E8 410 aaPredicted RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 ENTPD4Q9Y227 616 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 NME7Q9Y5B8 376 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 COL4A4P53420 1690 aaPredicted RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 A0A1B0GTQ1 180 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ARRDC5A6NEK1 342 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ANXA2P2A6NMY6 339 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 M0QYT0 321 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 RAD1O60671 282 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 RGS11O94810 467 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 KCNK5O95279 499 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 SFTPCP11686 197 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 TYRP14679 529 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 SMPD1P17405 629 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 PTAFRP25105 342 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 SMSP52788 366 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 DSC2Q02487 901 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 PTGES3Q15185 160 aaKnown RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 PAN3Q58A45 887 aaKnown RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 TCTE1Q5JU00 501 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 RTP2Q5QGT7 225 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ALG1LQ6GMV1 187 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ZNF425Q6IV72 752 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 PTCHD4Q6ZW05 846 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 USP53Q70EK8 1073 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 TSEN54Q7Z6J9 526 aaKnown RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 KRT77Q7Z794 578 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 RNF113BQ8IZP6 322 aaKnown RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 FAM46DQ8NEK8 389 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 TMIEQ8NEW7 156 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 MDGA1Q8NFP4 955 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ACOT12Q8WYK0 555 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 HHIPQ96QV1 700 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 NIPSNAP1Q9BPW8 284 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 FAM126AQ9BYI3 521 aaPredicted RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 ACTR6Q9GZN1 396 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 FZD8Q9H461 694 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 MALT1Q9UDY8 824 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 SLC6A14Q9UN76 642 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 TNFSF13BQ9Y275 285 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 GSTK1Q9Y2Q3 226 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 SMAD6O43541 496 aaKnown RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 PRKYO43930 277 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 S100A9P06702 114 aaKnown RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 NR0B1P51843 470 aaKnown RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 DCDP81605 110 aaKnown RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 PTPRCAPQ14761 206 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 ZRANB3Q5FWF4 1079 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DHRS7BQ6IAN0 325 aaPredicted RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 PYHIN1Q6K0P9 492 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 PTOV1Q86YD1 416 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 OR5M9Q8NGP3 310 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 COQ8AQ8NI60 647 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 METTL6Q8TCB7 284 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 POF1BQ8WVV4 589 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 GTF3AQ92664 365 aaKnown RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 MS4A3Q96HJ5 214 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 NARS2Q96I59 477 aaKnown RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 THAP7Q9BT49 309 aaPredicted RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 ANKRD19PQ9H560 264 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 RLIMQ9NVW2 624 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 FBXW11Q9UKB1 542 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 NEU3Q9UQ49 428 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 RPH3AQ9Y2J0 694 aaPredicted RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 A0A1B0GW55 424 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 A0A1B0GWJ7 208 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 ZNF729A6NN14 1252 aaPredicted RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 I6L893 689 aaPredicted RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 L7N2F9 121 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 SCAMP1O15126 338 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 RGS14O43566 566 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 CLN5O75503 358 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DUX4L2P0CJ85 424 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DUX4L3P0CJ86 424 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DUX4L4P0CJ87 422 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DUX4L5P0CJ88 424 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DUX4L6P0CJ89 424 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 DUX4L7P0CJ90 424 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 GPX2P18283 190 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 HOXA6P31267 233 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 RFX3P48380 749 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 CTBP2P56545 445 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 KIAA1024LP59773 190 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 RPL38P63173 70 aaKnown RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 TPBGQ13641 420 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 HLXQ14774 488 aaPredicted RBP9.25□□□□□ -0.93
VPS8-225ENST00000492449 ABRAXAS2Q15018 415 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 SPDYE7PQ495Y7 208 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 FAM76BQ5HYJ3 339 aa9.25□□□□□ -0.93
VPS8-225ENST00000492449 SPOUT1Q5T280 376 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms