RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CDYL2Q8N8U2 506 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 MORN4Q8NDC4 146 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 OR2W6PQ8NHA6 318 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 SLC2A12Q8TD20 617 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 DOK4Q8TEW6 326 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 SELENOMQ8WWX9 145 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 PPWD1Q96BP3 646 aaKnown RBP22.96■■□□□ 1.27
UPF3A-209ENST00000492270 C12orf65Q9H3J6 166 aaKnown RBP22.96■■□□□ 1.27
UPF3A-209ENST00000492270 TEX10Q9NXF1 929 aaPredicted RBP22.96■■□□□ 1.27
UPF3A-209ENST00000492270 DCDC2Q9UHG0 476 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 ERRFI1Q9UJM3 462 aaPredicted RBP22.96■■□□□ 1.27
UPF3A-209ENST00000492270 SLC12A4Q9UP95 1085 aa22.96■■□□□ 1.27
UPF3A-209ENST00000492270 SPTAN1Q13813 2472 aaKnown RBP22.96■■□□□ 1.27
UPF3A-209ENST00000492270 G3V2L1 256 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 GLRA3O75311 464 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 SLC25A12O75746 678 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 ZFAND5O76080 213 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 NR2F6P10588 404 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 TLX1P31314 330 aaPredicted RBP22.95■■□□□ 1.26
UPF3A-209ENST00000492270 TRHRP34981 398 aaPredicted RBP22.95■■□□□ 1.26
UPF3A-209ENST00000492270 STT3AP46977 705 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 HLCSP50747 726 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 PRKAA2P54646 552 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 KCNK10P57789 538 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 SLC25A25Q6KCM7 469 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 SLC22A9Q8IVM8 553 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 TANKQ92844 425 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 L3HYPDHQ96EM0 354 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 DGAT2Q96PD7 388 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 ZNF382Q96SR6 550 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 TRIM45Q9H8W5 580 aaPredicted RBP22.95■■□□□ 1.26
UPF3A-209ENST00000492270 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.95■■□□□ 1.26
UPF3A-209ENST00000492270 SNX6Q9UNH7 406 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 OSGIN2Q9Y236 505 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 ICE1Q9Y2F5 2266 aa22.95■■□□□ 1.26
UPF3A-209ENST00000492270 V9GYY5 206 aaPredicted RBP22.95■■□□□ 1.26
UPF3A-209ENST00000492270 A0A1W2PS29 197 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 ARHGAP10A1A4S6 786 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 ZNF500O60304 480 aaPredicted RBP22.94■■□□□ 1.26
UPF3A-209ENST00000492270 CRYABP02511 175 aaKnown RBP22.94■■□□□ 1.26
UPF3A-209ENST00000492270 PROCP04070 461 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 KLK1P06870 262 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 C10orf62Q5T681 223 aaPredicted RBP22.94■■□□□ 1.26
UPF3A-209ENST00000492270 HSDL2Q6YN16 418 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 GPRIN3Q6ZVF9 776 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 METTL4Q8N3J2 472 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 HORMAD2Q8N7B1 307 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 TMEM178AQ8NBL3 297 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 MYRIPQ8NFW9 859 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 DNAJB8Q8NHS0 232 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 ZNF721Q8TF20 911 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 SSC4DQ8WTU2 575 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 GSTO2Q9H4Y5 243 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 PPCSQ9HAB8 311 aa22.94■■□□□ 1.26
UPF3A-209ENST00000492270 CROCCQ5TZA2 2017 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 HRKO00198 91 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 MANBAO00462 879 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 NME2P1O60361 137 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 OR2J2O76002 312 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 NME2P22392 152 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 RASA2Q15283 850 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 MAPKAPK3Q16644 382 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 COMMD6Q7Z4G1 85 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.93■■□□□ 1.26
UPF3A-209ENST00000492270 CNPY4Q8N129 248 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 FRMD6Q96NE9 622 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 PSMG3-AS1Q96PY0 264 aa22.93■■□□□ 1.26
UPF3A-209ENST00000492270 SPTBN1Q01082 2364 aaKnown RBP22.92■■□□□ 1.26
UPF3A-209ENST00000492270 DIDO1Q9BTC0 2240 aaKnown RBP22.92■■□□□ 1.26
UPF3A-209ENST00000492270 ASPDHA6ND91 283 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 WWP2O00308 870 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 PGRMC2O15173 223 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 CDH16O75309 829 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 SLU7O95391 586 aaKnown RBP22.92■■□□□ 1.26
UPF3A-209ENST00000492270 GPR75O95800 540 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 COX7A2P14406 83 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 ALOX15P16050 662 aaPredicted RBP22.92■■□□□ 1.26
UPF3A-209ENST00000492270 HTR6P50406 440 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 SSR4P51571 173 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 HK2P52789 917 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 PLIN5Q00G26 463 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 GALNT1Q10472 559 aaPredicted RBP22.92■■□□□ 1.26
UPF3A-209ENST00000492270 CCNYL2Q5T2Q4 361 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 ZYG11AQ6WRX3 759 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 C4orf33Q8N1A6 199 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 CYP4Z2PQ8N1L4 340 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 TMEM156Q8N614 296 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 KCNA7Q96RP8 456 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 TSPAN10Q9H1Z9 355 aaPredicted RBP22.92■■□□□ 1.26
UPF3A-209ENST00000492270 WDR41Q9HAD4 459 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 BRF2Q9HAW0 419 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 AHSPQ9NZD4 102 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 MYOTQ9UBF9 498 aa22.92■■□□□ 1.26
UPF3A-209ENST00000492270 YARS2Q9Y2Z4 477 aaKnown RBP22.92■■□□□ 1.26
UPF3A-209ENST00000492270 CDK2AP1O14519 115 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 PLIN3O60664 434 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 UNC5CO95185 931 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 MYL2P10916 166 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 CHN1P15882 459 aa22.91■■□□□ 1.26
UPF3A-209ENST00000492270 RNF4P78317 190 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms