RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 POLR2CP19387 275 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MSH3P20585 1137 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CYP2A7P20853 494 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CD9P21926 228 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PSMA3P25788 255 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PSMB9P28065 219 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ALDH4A1P30038 563 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ERP29P30040 261 aaKnown RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 KRT20P35900 424 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MAP2K4P45985 399 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC15A1P46059 708 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GPR3P46089 330 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 RFX2P48378 723 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CLK3P49761 638 aaKnown RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GZMKP49863 264 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SULT1E1P49888 294 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GZMMP51124 257 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SGSHP51688 502 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 POLR2JP52435 117 aaKnown RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PGGT1BP53609 377 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 IST1P53990 364 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GEMP55040 296 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 DIO3P55073 304 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CDKN2DP55273 166 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 FOXA1P55317 472 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 LGALS4P56470 323 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MAP3K7CLP57077 242 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 OR2B6P58173 313 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TPI1P60174 286 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 VBP1P61758 197 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TIAL1Q01085 375 aaKnown RBP eCLIP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 HHEXQ03014 270 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 RAD51Q06609 339 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PIGFQ07326 219 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ADIGQ0VDE8 80 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PRKG2Q13237 762 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ASAH1Q13510 395 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 RAPSNQ13702 412 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CSHL1Q14406 222 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 IRF3Q14653 427 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MAD2L1BPQ15013 274 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZBTB6Q15916 424 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZIK1Q3SY52 487 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC39A12Q504Y0 691 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CEP78Q5JTW2 689 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TPRG1LQ5T0D9 272 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 OTUD3Q5T2D3 398 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 NDUFAF5Q5TEU4 345 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 HECTD2Q5U5R9 776 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MANEALQ5VSG8 457 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM171A1Q5VUB5 890 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 NXNL2Q5VZ03 156 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM219BQ5XKK7 198 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ANKS6Q68DC2 871 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 KDM4DQ6B0I6 523 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PM20D1Q6GTS8 502 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GLYATQ6IB77 296 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 FUT10Q6P4F1 479 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 KDELC1Q6UW63 502 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TMEM207Q6UWW9 146 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF517Q6ZMY9 492 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PAQR9Q6ZVX9 377 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF767PQ75MW2 155 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TMEM179BQ7Z7N9 219 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CYP4Z1Q86W10 505 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CALHM3Q86XJ0 350 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PLCZ1Q86YW0 608 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GRAMD2AQ8IUY3 354 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PLD3Q8IV08 490 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CCDC71Q8IV32 467 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CCDC28AQ8IWP9 274 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ARHGAP12Q8IWW6 846 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ADHFE1Q8IWW8 467 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MSRB3Q8IXL7 192 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC38A6Q8IZM9 456 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 RDH10Q8IZV5 341 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 DEFB106AQ8N104 65 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 EID3Q8N140 333 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SPATA6LQ8N4H0 392 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 C1orf52Q8N6N3 182 aaKnown RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 C12orf76Q8N812 135 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CCNYQ8ND76 341 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM83FQ8NEG4 500 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GPR150Q8NGU9 434 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GABPB2Q8TAK5 448 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CNIH3Q8TBE1 160 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PROKR1Q8TCW9 393 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ANKRD49Q8WVL7 239 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 KIAA1191Q96A73 305 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 KIAA1143Q96AT1 154 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PTERQ96BW5 349 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PYCR2Q96C36 320 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TUBGCP3Q96CW5 907 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZHX1-C8orf76Q96EF9 292 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF419Q96HQ0 510 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TEX37Q96LM6 180 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 RNF145Q96MT1 663 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF583Q96ND8 569 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF599Q96NL3 588 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TAAR9Q96RI9 348 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms