RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 SF3B4Q15427 424 aaKnown RBP eCLIP17.98■□□□□ 0.47
APTX-229ENST00000489583 FBXW10Q5XX13 1052 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 MED27Q6P2C8 311 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 ARSKQ6UWY0 536 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 SPATA6LQ8N4H0 392 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 SLC15A4Q8N697 577 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 FAM13CQ8NE31 585 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 GOT1L1Q8NHS2 421 aaPredicted RBP17.98■□□□□ 0.47
APTX-229ENST00000489583 CMTM7Q96FZ5 175 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 JSRP1Q96MG2 331 aaPredicted RBP17.98■□□□□ 0.47
APTX-229ENST00000489583 MAPKAP1Q9BPZ7 522 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 POLDIP3Q9BY77 421 aaKnown RBP17.98■□□□□ 0.47
APTX-229ENST00000489583 RAB17Q9H0T7 212 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 PLAC1Q9HBJ0 212 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 PRDM7Q9NQW5 492 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 ADGRE2Q9UHX3 823 aa17.98■□□□□ 0.47
APTX-229ENST00000489583 UTP11Q9Y3A2 253 aaKnown RBP17.98■□□□□ 0.47
APTX-229ENST00000489583 A0A0G2JMM0 328 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 A0A1W2PPB8 328 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 A0A1W2PRS3 328 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 HSPB2A8KAH6 182 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 KIR3DP1A8MWS1 328 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 HIST1H1TP22492 207 aaPredicted RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 ATP5A1P25705 553 aaKnown RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 SERPINB3P29508 390 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 DNAJA1P31689 397 aaKnown RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 BUD31P41223 144 aaPredicted RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 KIR2DL3P43628 341 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 ID2Q02363 134 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 CALCOCO2Q13137 446 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 TBCCQ15814 346 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 HSPB2Q16082 182 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 PIGGQ5H8A4 983 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 C8orf74Q6P047 294 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 RAPH1Q70E73 1250 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 LRRC70Q7Z2Q7 622 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 NUBPLQ8TB37 319 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 TANKQ92844 425 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 NINJ1Q92982 152 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 WDR34Q96EX3 536 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 SENP5Q96HI0 755 aaPredicted RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 CPNE1Q99829 537 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 PELOQ9BRX2 385 aaKnown RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 TMEM79Q9BSE2 394 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 RPF2Q9H7B2 306 aaKnown RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 TUBA8Q9NY65 449 aaPredicted RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 CNIH4Q9P003 139 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 PHF11Q9UIL8 331 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 ZNF490Q9ULM2 529 aaPredicted RBP17.97■□□□□ 0.47
APTX-229ENST00000489583 ATG4BQ9Y4P1 393 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 ANGPTL3Q9Y5C1 460 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 CLDN16Q9Y5I7 305 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 LIPGQ9Y5X9 500 aa17.97■□□□□ 0.47
APTX-229ENST00000489583 A0A0G2JNJ9 132 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 CAPN14A8MX76 684 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 TAPBPO15533 448 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 RAD51CO43502 376 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 OR10H2O60403 315 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 CCL3P10147 92 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 UQCRC1P31930 480 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 RPL21P46778 160 aaKnown RBP17.96■□□□□ 0.47
APTX-229ENST00000489583 STT3AP46977 705 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 HYAL4Q2M3T9 481 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 FBXO48Q5FWF7 155 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 VN1R5Q7Z5H4 357 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 MYLK4Q86YV6 388 aaPredicted RBP17.96■□□□□ 0.47
APTX-229ENST00000489583 FBXW8Q8N3Y1 598 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 ZNF321PQ8N8H1 164 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 STAG3L4Q8TBR4 150 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 ESAMQ96AP7 390 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 RGMAQ96B86 450 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 RMND5BQ96G75 393 aaPredicted RBP17.96■□□□□ 0.47
APTX-229ENST00000489583 GAL3ST4Q96RP7 486 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 CD244Q9BZW8 370 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 CAB39LQ9H9S4 337 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 ZFP64Q9NPA5 681 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 OPTCQ9UBM4 332 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 Q9UFV3 132 aa17.96■□□□□ 0.47
APTX-229ENST00000489583 MTO1Q9Y2Z2 717 aaKnown RBP17.96■□□□□ 0.47
APTX-229ENST00000489583 SETD2Q9BYW2 2564 aaPredicted RBP17.96■□□□□ 0.47
APTX-229ENST00000489583 DVL2O14641 736 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 PHGDHO43175 533 aaKnown RBP17.95■□□□□ 0.46
APTX-229ENST00000489583 DIAPH2O60879 1101 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 SH3BGRLO75368 114 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 TGFB1P01137 390 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 DNASE1P24855 282 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 PIGAP37287 484 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 SLAMF1Q13291 335 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 RIPPLY2Q5TAB7 128 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 OR4C11Q6IEV9 310 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 TBC1D1Q86TI0 1168 aaPredicted RBP17.95■□□□□ 0.46
APTX-229ENST00000489583 ZZZ3Q8IYH5 903 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 TAGAPQ8N103 731 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 MMGT1Q8N4V1 131 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 PDPRQ8NCN5 879 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 ZNF721Q8TF20 911 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 SPACA9Q96E40 222 aaPredicted RBP17.95■□□□□ 0.46
APTX-229ENST00000489583 ERP44Q9BS26 406 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 CNPPD1Q9BV87 410 aa17.95■□□□□ 0.46
APTX-229ENST00000489583 MS4A8Q9BY19 250 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms