RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 IL23RQ5VWK5 629 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 LIPJQ5W064 366 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 SLC25A24Q6NUK1 477 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 SLC22A16Q86VW1 577 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 C17orf64Q86WR6 236 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 TMEM178AQ8NBL3 297 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 GMCL1P1Q8NEA9 526 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 PHYHIPQ92561 330 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 FCGR1BQ92637 280 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 AZIN2Q96A70 460 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 TMEM45BQ96B21 275 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 PCED1BQ96HM7 432 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 VPS39Q96JC1 886 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 CXXC4Q9H2H0 198 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 C3orf14Q9HBI5 128 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 S100A14Q9HCY8 104 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 VPS54Q9P1Q0 977 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 ZNF195O14628 629 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 CHADO15335 359 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 CLDN3O15551 220 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 FGF19O95750 216 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 KRT6BP04259 564 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 HIST1H2AGP0C0S8 130 aaPredicted RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 TSPY4P0CV99 314 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 TSPY10P0CW01 314 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 PRSS56P0CW18 603 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 C4BPBP20851 252 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 PRDX2P32119 198 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 MAP2K2P36507 400 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 ALDH3B1P43353 468 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 KRT6CP48668 564 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 TRPC1P48995 793 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 ELP6Q0PNE2 266 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 TAB1Q15750 504 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 KRTAP24-1Q3LI83 254 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 RIPPLY2Q5TAB7 128 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 LIPKQ5VXJ0 399 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 RTL6Q6ICC9 239 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 FAM53AQ6NSI3 398 aaPredicted RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 CDC42EP5Q6NZY7 148 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 ARSKQ6UWY0 536 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 PTAR1Q7Z6K3 402 aaPredicted RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 ITIH5Q86UX2 942 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 SLC22A15Q8IZD6 547 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 PARP8Q8N3A8 854 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 BCORP1Q8N888 145 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 OR4D10Q8NGI6 311 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 C8orf46Q8TAG6 207 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 SMAP2Q8WU79 429 aaPredicted RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 ARHGAP45Q92619 1136 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 HIST1H2ACQ93077 130 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 RBM18Q96H35 190 aaKnown RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 ZNF486Q96H40 463 aaPredicted RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 FUCA2Q9BTY2 467 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 PAPOLGQ9BWT3 736 aaKnown RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 CARD6Q9BX69 1037 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 TEX13BQ9BXU2 312 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 ACTR8Q9H981 624 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 YAE1D1Q9NRH1 226 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 MED17Q9NVC6 651 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 TMOD2Q9NZR1 351 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 ATXN10Q9UBB4 475 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 MGAT4BQ9UQ53 548 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 GREB1LQ9C091 1923 aaPredicted RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 FGD5Q6ZNL6 1462 aa3.71□□□□□ -1.82
XRN1-213ENST00000489241 MYH14Q7Z406 1995 aaKnown RBP3.71□□□□□ -1.82
XRN1-213ENST00000489241 ABCC4O15439 1325 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 KIF7Q2M1P5 1343 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 RNF123Q5XPI4 1314 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 A0A1B0GWJ7 208 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 NTN3O00634 580 aaPredicted RBP3.7□□□□□ -1.82
XRN1-213ENST00000489241 CCSO14618 274 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ANGPT2O15123 496 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 APBB3O95704 486 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ANGPTL1O95841 491 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 AMBPP02760 352 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 LYNP07948 512 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 IL4RP24394 825 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 CYP2F1P24903 491 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ADSSP30520 456 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ACADSBP45954 432 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 FHITP49789 147 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 HILS1P60008 231 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 GUCY2DQ02846 1103 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 RAPSNQ13702 412 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 RFTN1Q14699 578 aaPredicted RBP3.7□□□□□ -1.82
XRN1-213ENST00000489241 ADPRMQ3LIE5 342 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ZNF876PQ49A33 203 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 FFAR4Q5NUL3 377 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ARMCX2Q7L311 632 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 PPP1R42Q7Z4L9 355 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ZNF573Q86YE8 665 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 APLFQ8IW19 511 aaPredicted RBP3.7□□□□□ -1.82
XRN1-213ENST00000489241 TBC1D21Q8IYX1 336 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 LSMEM2Q8N112 164 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 CERS5Q8N5B7 392 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 COLGALT1Q8NBJ5 622 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 FAM76AQ8TAV0 307 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 NCLNQ969V3 563 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms