RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 COPS7AQ9UBW8 275 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 FETUBQ9UGM5 382 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 TBK1Q9UHD2 729 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 PPT2Q9UMR5 302 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 KLF13Q9Y2Y9 288 aaPredicted RBP16.5■□□□□ 0.23
ITGB1-215ENST00000488494 A0A1W2PR48 441 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 GLOD5A6NK44 160 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 TMEM200CA6NKL6 621 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 NPIPA5E9PKD4 350 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 WWP2O00308 870 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 PPP6CO00743 305 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 AIFM1O95831 613 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 CLDN1O95832 211 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 ZNF24P17028 368 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 TAC1P20366 129 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 CDH13P55290 713 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 HERVK_113P63132 956 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 C10orf62Q5T681 223 aaPredicted RBP16.49■□□□□ 0.23
ITGB1-215ENST00000488494 MRM1Q6IN84 353 aaKnown RBP16.49■□□□□ 0.23
ITGB1-215ENST00000488494 MILR1Q7Z6M3 343 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 LCA5Q86VQ0 697 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 CPSF7Q8N684 471 aaKnown RBP16.49■□□□□ 0.23
ITGB1-215ENST00000488494 TANKQ92844 425 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 GPR137Q96N19 417 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 TMEM237Q96Q45 408 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 C1QTNF3Q9BXJ4 246 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 ERVK-6Q9BXR3 956 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 MRPL1Q9BYD6 325 aaKnown RBP16.49■□□□□ 0.23
ITGB1-215ENST00000488494 L2HGDHQ9H9P8 463 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 FARSBQ9NSD9 589 aaKnown RBP16.49■□□□□ 0.23
ITGB1-215ENST00000488494 PSD3Q9NYI0 1048 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 MYOTQ9UBF9 498 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 NPIPA1Q9UND3 350 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 YARS2Q9Y2Z4 477 aaKnown RBP16.49■□□□□ 0.23
ITGB1-215ENST00000488494 ASB4Q9Y574 426 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 ICE1Q9Y2F5 2266 aa16.49■□□□□ 0.23
ITGB1-215ENST00000488494 A0A1B0GUH1 482 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 PROM1O43490 865 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 MLYCDO95822 493 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 PYGBP11216 843 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 ALOX15P16050 662 aaPredicted RBP16.48■□□□□ 0.23
ITGB1-215ENST00000488494 MEOX1P50221 254 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 HK2P52789 917 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 RBPJQ06330 500 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 DGAT2L6Q6ZPD8 337 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 MAMDC2Q7Z304 686 aaPredicted RBP16.48■□□□□ 0.23
ITGB1-215ENST00000488494 SIAH3Q8IW03 269 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 TRPC4APQ8TEL6 797 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 MZB1Q8WU39 189 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 ASB15Q8WXK1 588 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 PPWD1Q96BP3 646 aaKnown RBP16.48■□□□□ 0.23
ITGB1-215ENST00000488494 MAGED4Q96JG8 741 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 RASL10BQ96S79 203 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 SH3BGRL2Q9UJC5 107 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 ERVK-11Q9UQG0 969 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 CROCCQ5TZA2 2017 aa16.48■□□□□ 0.23
ITGB1-215ENST00000488494 TRGV8A0A0C4DH27 118 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 A8MVJ9 347 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 HRKO00198 91 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 DYRK3O43781 588 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 OR10H2O60403 315 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 DLX3O60479 287 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 ZG16O60844 167 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 OR6B1O95007 311 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 SHBGP04278 402 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 RFC3P40938 356 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 SOX3P41225 446 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 GPR85P60893 370 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 RNF4P78317 190 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 RNFT1Q5M7Z0 435 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 OR52E8Q6IFG1 317 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 MDGA2Q7Z553 956 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 EIF1ADQ8N9N8 165 aaKnown RBP16.47■□□□□ 0.23
ITGB1-215ENST00000488494 C7orf57Q8NEG2 295 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 ACMSDQ8TDX5 336 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 DOK4Q8TEW6 326 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 ZNF721Q8TF20 911 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 UBLCP1Q8WVY7 318 aaPredicted RBP16.47■□□□□ 0.23
ITGB1-215ENST00000488494 HBEGFQ99075 208 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 WDR41Q9HAD4 459 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 HPF1Q9NWY4 346 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 TEX10Q9NXF1 929 aaPredicted RBP16.47■□□□□ 0.23
ITGB1-215ENST00000488494 TRPS1Q9UHF7 1281 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 SNX6Q9UNH7 406 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 SLC12A4Q9UP95 1085 aa16.47■□□□□ 0.23
ITGB1-215ENST00000488494 ARHGAP10A1A4S6 786 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 SMIM23A6NLE4 172 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 WASHC1A8K0Z3 465 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 FOXO6A8MYZ6 492 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 SLC19A2O60779 497 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 SUPT7LO94864 414 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 OR4F21O95013 312 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 PDYNP01213 254 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 KLK1P06870 262 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 ATP5F1P24539 256 aaPredicted RBP16.46■□□□□ 0.23
ITGB1-215ENST00000488494 SLCO1A2P46721 670 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 CLCQ05315 142 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 TCHHL1Q5QJ38 904 aaPredicted RBP16.46■□□□□ 0.23
ITGB1-215ENST00000488494 ZNF678Q5SXM1 525 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 COMMD6Q7Z4G1 85 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms