RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 HPS1Q92902 700 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 LGALS12Q96DT0 336 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 OR51V1Q9H2C8 321 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 TBC1D17Q9HA65 648 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 MRPS7Q9Y2R9 242 aaKnown RBP11.26□□□□□ -0.61
TRA2B-214ENST00000487615 B4DGG1 531 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 SNX4O95219 450 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 OLFM2O95897 454 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 ALAS2P22557 587 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 ITPKBP27987 946 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 SLC6A12P48065 614 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 TAS2R38P59533 333 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 GINS1Q14691 196 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 CCSMST1Q4G0I0 132 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 DEFB134Q4QY38 66 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 TPRG1LQ5T0D9 272 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 TMEM80Q96HE8 168 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 MCHR1Q99705 422 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 TSSK6Q9BXA6 273 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 VN1R3Q9BXE9 311 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 BRCA1P38398 1863 aaKnown RBP11.26□□□□□ -0.61
TRA2B-214ENST00000487615 TMEM202A6NGA9 273 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 OXSR1O95747 527 aaPredicted RBP11.26□□□□□ -0.61
TRA2B-214ENST00000487615 ADAP00813 363 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 HLA-DQA2P01906 255 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 STSP08842 583 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 SLC5A2P31639 672 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 IRS1P35568 1242 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 IL12RB1P42701 662 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 RORCP51449 518 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 QPRTQ15274 297 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 FAM214AQ32MH5 1076 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 SLC9B2Q86UD5 537 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 METTL4Q8N3J2 472 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 OR8J1Q8NGP2 316 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 ZNF563Q8TA94 476 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 NECTIN3Q9NQS3 549 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 OR52A4PA6NMU1 304 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 NUDT7P0C024 238 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 PRR35P0CG20 571 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 SMIM18P0DKX4 95 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 ITGAMP11215 1152 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 GJA4P35212 333 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 SLC5A12Q1EHB4 618 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 MICAQ29983 383 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 TMEM107Q6UX40 140 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 RNF111Q6ZNA4 994 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 MINDY2Q8NBR6 621 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 KCT2Q8NC54 265 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 DENND6BQ8NEG7 585 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 CDCA3Q99618 268 aaPredicted RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 FBRSQ9HAH7 460 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 KCNK12Q9HB15 430 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 CROCCQ5TZA2 2017 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 ZNF860A6NHJ4 632 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 TFECO14948 347 aaPredicted RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 JRKO75564 520 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 CH25HO95992 272 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 P2RY2P41231 377 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 PGDP52209 483 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 RPS15AP62244 130 aaKnown RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 LRIF1Q5T3J3 769 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 MEDAGQ5VYS4 303 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 FAM219BQ5XKK7 198 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 TSTD1Q8NFU3 115 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 PITHD1Q9GZP4 211 aaPredicted RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 ABCB9Q9NP78 766 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 HRASLS2Q9NWW9 162 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 ZNF225Q9UK10 706 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 SLC5A10A0PJK1 596 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 AGRPO00253 132 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 CCRL2O00421 344 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 BTN3A3O00478 584 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 PGRMC2O15173 223 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 GPX2P18283 190 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 CCR2P41597 374 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 CDH11P55287 796 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 RPS3AP61247 264 aaKnown RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 SCN1BQ07699 218 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 DDI2Q5TDH0 399 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 ZNF691Q5VV52 312 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 OR10H4Q8NGA5 316 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 OR9Q2Q8NGE9 314 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 ALG14Q96F25 216 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 KCNN2Q9H2S1 579 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 PAK1IP1Q9NWT1 392 aaPredicted RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 RHPN2P1A8MT19 583 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 HOXC11O43248 304 aaPredicted RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 CLEC3AO75596 197 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 KCNK5O95279 499 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 GUCA1AP43080 201 aaPredicted RBP11.25□□□□□ -0.61
TRA2B-214ENST00000487615 VLDLRP98155 873 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 ID2Q02363 134 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 BCL7AQ4VC05 210 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 ZNF367Q7RTV3 350 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 AKAP14Q86UN6 197 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 FAM86B1Q8N7N1 296 aa11.25□□□□□ -0.61
TRA2B-214ENST00000487615 WDR81Q562E7 1941 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms