RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SSR2P43308 183 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 STT3AP46977 705 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 DNASE1L1P49184 302 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 NUP107P57740 925 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 GUCY2DQ02846 1103 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 TFF3Q07654 80 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 FOXO1Q12778 655 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 ASPHQ12797 758 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 MPEG1Q2M385 716 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 NDUFAF5Q5TEU4 345 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 C18orf63Q68DL7 685 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 GRHL2Q6ISB3 625 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 OPN5Q6U736 354 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 ZDHHC24Q6UX98 284 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 TRILQ7L0X0 811 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 TBC1D1Q86TI0 1168 aaPredicted RBP11.28□□□□□ -0.6
VPS16-208ENST00000487461 CCDC25Q86WR0 208 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 CCDC71Q8IV32 467 aaPredicted RBP11.28□□□□□ -0.6
VPS16-208ENST00000487461 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 TEX9Q8N6V9 391 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 GOLM1Q8NBJ4 401 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 HUS1BQ8NHY5 278 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 FBXO25Q8TCJ0 367 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 DOK4Q8TEW6 326 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 CHTF18Q8WVB6 975 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 KCTD4Q8WVF5 259 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 RGMAQ96B86 450 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 RPF2Q9H7B2 306 aaKnown RBP11.28□□□□□ -0.6
VPS16-208ENST00000487461 IL1RL2Q9HB29 575 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 MCCC2Q9HCC0 563 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 SEMA4BQ9NPR2 832 aaPredicted RBP11.28□□□□□ -0.6
VPS16-208ENST00000487461 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
VPS16-208ENST00000487461 TUBA8Q9NY65 449 aaPredicted RBP11.28□□□□□ -0.6
VPS16-208ENST00000487461 UTP11Q9Y3A2 253 aaKnown RBP11.28□□□□□ -0.6
VPS16-208ENST00000487461 ADGRG4Q8IZF6 3080 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 EML6Q6ZMW3 1958 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 A0A1B0GVC2 190 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 ATP6AP2A0A1C7CYW4 349 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 HMX2A2RU54 273 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 LRRC14BA6NHZ5 514 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 FAM90A27PA6NNH2 459 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 PRKRAO75569 313 aaKnown RBP11.27□□□□□ -0.61
VPS16-208ENST00000487461 ATP6AP2O75787 350 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 IGKV3-11P04433 115 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 P04436 131 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 CELA3AP09093 270 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 CCL3P10147 92 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 EPB42P16452 691 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 IGFBP2P18065 325 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 SERPINB1P30740 379 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 PIK3CBP42338 1070 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 MAGEA5P43359 124 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 IRF9Q00978 393 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 CAV1Q03135 178 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 FOLH1Q04609 750 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 DDX39BQ13838 428 aaKnown RBP11.27□□□□□ -0.61
VPS16-208ENST00000487461 HYAL4Q2M3T9 481 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 ZNF791Q3KP31 576 aaPredicted RBP11.27□□□□□ -0.61
VPS16-208ENST00000487461 ZNF585AQ6P3V2 769 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 LYPD8Q6UX82 237 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 GK5Q6ZS86 529 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 FAM47EQ6ZV65 393 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 ACAD11Q709F0 780 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 GPR180Q86V85 440 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 C9orf40Q8IXQ3 194 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 CENPLQ8N0S6 344 aaPredicted RBP11.27□□□□□ -0.61
VPS16-208ENST00000487461 FAM109AQ8N4B1 249 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 C7orf57Q8NEG2 295 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 NUBPLQ8TB37 319 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 TANKQ92844 425 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 RBM18Q96H35 190 aaKnown RBP11.27□□□□□ -0.61
VPS16-208ENST00000487461 DGAT2Q96PD7 388 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 SMC6Q96SB8 1091 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 MTERF1Q99551 399 aaKnown RBP11.27□□□□□ -0.61
VPS16-208ENST00000487461 SH2D2AQ9NP31 389 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 KCNJ16Q9NPI9 418 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 SACM1LQ9NTJ5 587 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 TNFRSF10DQ9UBN6 386 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 COPS7AQ9UBW8 275 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 ADGRE2Q9UHX3 823 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 ACOT9Q9Y305 439 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 ATG4BQ9Y4P1 393 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 TACC2O95359 2948 aa11.27□□□□□ -0.61
VPS16-208ENST00000487461 INTS1Q8N201 2190 aaKnown RBP11.26□□□□□ -0.61
VPS16-208ENST00000487461 OR14I1A6ND48 311 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 PLPP1O14494 284 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 PROM1O43490 865 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 NADKO95544 446 aaPredicted RBP11.26□□□□□ -0.61
VPS16-208ENST00000487461 C2P06681 752 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 COX7A2P14406 83 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 ACVR2AP27037 513 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 STX2P32856 288 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 PIGAP37287 484 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 RAP1GDS1P52306 607 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 HNRNPH2P55795 449 aaKnown RBP11.26□□□□□ -0.61
VPS16-208ENST00000487461 RPS13P62277 151 aaKnown RBP11.26□□□□□ -0.61
VPS16-208ENST00000487461 BIKQ13323 160 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 NAB1Q13506 487 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 SLC10A1Q14973 349 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms