RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	THAP2	Q9H0W7	228 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ING2	Q9H160	280 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	SLC25A51	Q9H1U9	297 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ARFGAP3	Q9NP61	516 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	FGF21	Q9NSA1	209 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	LCMT1	Q9UIC8	334 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ANAPC7	Q9UJX3	599 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	FARSA	Q9Y285	508 aa	Known RBP	3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	DNAJC16	Q9Y2G8	782 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	WDR37	Q9Y2I8	494 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ZNF711	Q9Y462	761 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PCNX1	Q96RV3	2341 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	CELSR2	Q9HCU4	2923 aa		3.81	□□□□□ -1.8
SNRNP40-205	ENST00000486941	CRYBG3	Q68DQ2	2970 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941		A0A087X0T9	212 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	GAGE12J	A6NER3	117 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	OR5K3	A6NET4	321 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TLCD2	A6NGC4	264 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ARGFX	A6NJG6	315 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ZNF487	B1APH4	448 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TCP11X1	B4DZS4	312 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KCNK1	O00180	336 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	MTX2	O75431	263 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	SCRG1	O75711	98 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	POP7	O75817	140 aa	Known RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TMEM63A	O94886	807 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PROSC	O94903	275 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	EPO	P01588	193 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	SERPING1	P05155	500 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KLK3	P07288	261 aa	Predicted RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ALDOC	P09972	364 aa	Known RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	RAB40AL	P0C0E4	278 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PIRT	P0C851	137 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	FAM228B	P0C875	321 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PKM	P14618	531 aa	Known RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KDELR1	P24390	212 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PRIM2	P49643	509 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	GSDMD	P57764	484 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TAS2R40	P59535	323 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KRTAP10-12	P60413	245 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PPP1CA	P62136	330 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	RPS18	P62269	152 aa	Known RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	AP1B1	Q10567	949 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PMPCA	Q10713	525 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ZBTB17	Q13105	803 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	GALNT3	Q14435	633 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PDK1	Q15118	436 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	RPE65	Q16518	533 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	EIF2S3L	Q2VIR3	472 aa	Known RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ATP13A5	Q4VNC0	1218 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TEX44	Q53QW1	395 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	DNTTIP2	Q5QJE6	756 aa	Known RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PLEKHS1	Q5SXH7	462 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	FNBP1L	Q5T0N5	605 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ZDHHC20	Q5W0Z9	365 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	HIST2H2BC	Q6DN03	193 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	JMJD6	Q6NYC1	403 aa	Predicted RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ALKBH5	Q6P6C2	394 aa	Known RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	FAM199X	Q6PEV8	388 aa	Predicted RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	AMZ2	Q86W34	360 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TRAPPC5	Q8IUR0	188 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	DSEL	Q8IZU8	1212 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	CLIP4	Q8N3C7	705 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PLD5	Q8N7P1	536 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	SLC38A9	Q8NBW4	561 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	GDAP1	Q8TB36	358 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	MR1	Q95460	341 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PNPLA2	Q96AD5	504 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ZNF501	Q96CX3	271 aa	Predicted RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TTC25	Q96NG3	672 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	NAP1L5	Q96NT1	182 aa	Predicted RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	RNF157	Q96PX1	679 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	RUFY1	Q96T51	708 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	MAP3K3	Q99759	626 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	NLN	Q9BYT8	704 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TRABD	Q9H4I3	376 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	SYTL2	Q9HCH5	934 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	IL26	Q9NPH9	171 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KRCC1	Q9NPI7	259 aa	Predicted RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	HRASLS2	Q9NWW9	162 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	C5AR2	Q9P296	337 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	UVRAG	Q9P2Y5	699 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TRIM10	Q9UDY6	481 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KCNG2	Q9UJ96	466 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ERRFI1	Q9UJM3	462 aa	Predicted RBP	3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	ACSL5	Q9ULC5	683 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	BTRC	Q9Y297	605 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	DTNA	Q9Y4J8	743 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PKDREJ	Q9NTG1	2253 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PCM1	Q15154	2024 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	LRBA	P50851	2863 aa		3.8	□□□□□ -1.8
SNRNP40-205	ENST00000486941	C2CD3	Q4AC94	2353 aa		3.79	□□□□□ -1.8
SNRNP40-205	ENST00000486941	TRBV5-7	A0A0A0MS05	114 aa		3.79	□□□□□ -1.8
SNRNP40-205	ENST00000486941	LOC285095	A0A1B0GVY8	99 aa		3.79	□□□□□ -1.8
SNRNP40-205	ENST00000486941	FAM234B	A2RU67	622 aa		3.79	□□□□□ -1.8
SNRNP40-205	ENST00000486941	MGAT4D	A6NG13	374 aa		3.79	□□□□□ -1.8
SNRNP40-205	ENST00000486941	C3orf70	A6NLC5	250 aa	Predicted RBP	3.79	□□□□□ -1.8
SNRNP40-205	ENST00000486941	PCDH17	O14917	1159 aa		3.79	□□□□□ -1.8
SNRNP40-205	ENST00000486941	KLHL41	O60662	606 aa		3.79	□□□□□ -1.8

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