RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 EDNRAP25101 427 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 FCGR2BP31994 310 aaPredicted RBP3.85□□□□□ -1.79
SMC4-218ENST00000486711 FCGR2CP31995 323 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 NDST2P52849 883 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 GSCP56915 257 aaPredicted RBP3.85□□□□□ -1.79
SMC4-218ENST00000486711 CDKL1Q00532 357 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 FASTKD3Q14CZ7 662 aaKnown RBP3.85□□□□□ -1.79
SMC4-218ENST00000486711 MOGAT2Q3SYC2 334 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 ZC2HC1BQ5TFG8 222 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 HIST2H2AA3Q6FI13 130 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 NEK5Q6P3R8 708 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 ZNF497Q6ZNH5 498 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 KDM8Q8N371 416 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 ANKRD20A12PQ8NF67 263 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 OR6F1Q8NGZ6 308 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 U2AF1L4Q8WU68 220 aaKnown RBP3.85□□□□□ -1.79
SMC4-218ENST00000486711 LIPHQ8WWY8 451 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 RAB39BQ96DA2 213 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 PCED1BQ96HM7 432 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 AGAP4Q96P64 663 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 LGMNQ99538 433 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 OPRPNQ99935 248 aaPredicted RBP3.85□□□□□ -1.79
SMC4-218ENST00000486711 TRIM51Q9BSJ1 452 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 DPEP3Q9H4B8 488 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 NMUR1Q9HB89 426 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 GDF3Q9NR23 364 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 VPS54Q9P1Q0 977 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 ERVK-18Q9QC07 812 aa3.85□□□□□ -1.79
SMC4-218ENST00000486711 MRPS18CQ9Y3D5 142 aaKnown RBP3.85□□□□□ -1.79
SMC4-218ENST00000486711 SHISA7A6NL88 538 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 A8MU76 341 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 MPTX1A8MV57 137 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 TRAFD1O14545 582 aaPredicted RBP3.84□□□□□ -1.79
SMC4-218ENST00000486711 PRPSAP2O60256 369 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 NME2P1O60361 137 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 CSO75390 466 aaKnown RBP3.84□□□□□ -1.79
SMC4-218ENST00000486711 STAM2O75886 525 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 ZFAND5O76080 213 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 TXNDC12O95881 172 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 MT-ATP6P00846 226 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 PGK2P07205 417 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 APRTP07741 180 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 ADORA3P0DMS8 318 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 MBL2P11226 248 aaPredicted RBP3.84□□□□□ -1.79
SMC4-218ENST00000486711 GLRA1P23415 457 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 FCARP24071 287 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 PPP2R1AP30153 589 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 ACADSBP45954 432 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 NUMBP49757 651 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 CRYBA2P53672 197 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 IL1RL1Q01638 556 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 GAMTQ14353 236 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 NECTIN1Q15223 517 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 WSCD2Q2TBF2 565 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 GPAT3Q53EU6 434 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 FASTKD1Q53R41 847 aaKnown RBP3.84□□□□□ -1.79
SMC4-218ENST00000486711 TBC1D10CQ8IV04 446 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 MRPL43Q8N983 215 aaKnown RBP3.84□□□□□ -1.79
SMC4-218ENST00000486711 ICA1LQ8NDH6 482 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 OR52E1Q8NGJ3 308 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 TMEM186Q96B77 213 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 ATXN7L3BQ96GX2 97 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 GPR137Q96N19 417 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 FAM111AQ96PZ2 611 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 RAB40CQ96S21 281 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 MCRIP2Q9BUT9 160 aaKnown RBP3.84□□□□□ -1.79
SMC4-218ENST00000486711 FGFBP2Q9BYJ0 223 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 NACA2Q9H009 215 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 PLEKHA3Q9HB20 300 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 DNPEPQ9ULA0 475 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 RNF215Q9Y6U7 377 aa3.84□□□□□ -1.79
SMC4-218ENST00000486711 OR5H15A6NDH6 313 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 SRRM4A7MD48 611 aaKnown RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 CSDE1O75534 798 aaKnown RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 ANXA9O76027 345 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 PTMAP06454 111 aaKnown RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 HIST1H2AGP0C0S8 130 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 ZSCAN5DPP0CG00 497 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 ETS1P14921 441 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 CD1DP15813 335 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 ARF4P18085 180 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 PTMSP20962 102 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 TNFRSF4P43489 277 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 ZFP36L2P47974 494 aaKnown RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 ATXN3P54252 364 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 PEX3P56589 373 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 MSLNQ13421 630 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 MLF2Q15773 248 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 UPP1Q16831 310 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 ECSCRQ19T08 205 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 TTC31Q49AM3 519 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 CMPK2Q5EBM0 449 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 HERC4Q5GLZ8 1057 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 OR6B2Q6IFH4 312 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 CDC42EP5Q6NZY7 148 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 WDR88Q6ZMY6 472 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 Q6ZRG5 221 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 ZFAND4Q86XD8 727 aa3.83□□□□□ -1.8
SMC4-218ENST00000486711 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.83□□□□□ -1.8
SMC4-218ENST00000486711 OR4N5Q8IXE1 308 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms