RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 PAGE3Q5JUK9 113 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 ZNF433Q8N7K0 673 aaPredicted RBP12.9□□□□□ -0.34
PKD1-219ENST00000486339 OR52N2Q8NGI0 321 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 IPCEF1Q8WWN9 437 aaPredicted RBP12.9□□□□□ -0.34
PKD1-219ENST00000486339 METTL2AQ96IZ6 378 aaKnown RBP12.9□□□□□ -0.34
PKD1-219ENST00000486339 BIRC8Q96P09 236 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 TSSK6Q9BXA6 273 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 TMEM168Q9H0V1 697 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 SLC6A17Q9H1V8 727 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 KCNK13Q9HB14 408 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 PLGRKTQ9HBL7 147 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 LOC100130705A0A1B0GUX0 176 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 AIREO43918 545 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 GPR37L1O60883 481 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 SEMA3DO95025 777 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 ACY1Q03154 408 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 ZCCHC12Q6PEW1 402 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 CD300LGQ6UXG3 332 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 ZNF550Q7Z398 422 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 SLCO6A1Q86UG4 719 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 OR5K2Q8NHB8 316 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 POLR2J2Q9GZM3 115 aaKnown RBP12.9□□□□□ -0.34
PKD1-219ENST00000486339 PTGES2Q9H7Z7 377 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 ABCB10Q9NRK6 738 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 TMEM45AQ9NWC5 275 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 HCN2Q9UL51 889 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 PCDHB14Q9Y5E9 798 aa12.9□□□□□ -0.34
PKD1-219ENST00000486339 DAPL1A0PJW8 107 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 HCRTR2O43614 444 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 CH25HO95992 272 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 CHRM5P08912 532 aaPredicted RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 NSDHLQ15738 373 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 CGB2Q6NT52 195 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 HMGN2P46Q86SG4 172 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 LMNTD1Q8N9Z9 388 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 GATSQ8NAP1 163 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 PSMA8Q8TAA3 256 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 PITHD1Q9GZP4 211 aaPredicted RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 POT1Q9NUX5 634 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 C14orf105Q9NVL8 296 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 PLCL2Q9UPR0 1127 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 BCAT2O15382 392 aaPredicted RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 CPNE3O75131 537 aaKnown RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 PVRP15151 417 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 IMPA1P29218 277 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 NUDT6P53370 316 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 CSTF1Q05048 431 aaKnown RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 FCHO2Q0JRZ9 810 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 SBSNQ6UWP8 590 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 ACOT4Q8N9L9 421 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 THAP3Q8WTV1 239 aaPredicted RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 STON2Q8WXE9 905 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 FCGR1BQ92637 280 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 GAL3ST3Q96A11 431 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 ECHDC3Q96DC8 303 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 DPPA5A6NC42 116 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 AK1P00568 194 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 ZNF3P17036 446 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 TAP2Q03519 686 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 RCAN2Q14206 197 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 PIGGQ5H8A4 983 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 C11orf88Q6PI97 169 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 HSDL2Q6YN16 418 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 MACROD1Q9BQ69 325 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 EPHX3Q9H6B9 360 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 TRNAU1APQ9NX07 287 aaKnown RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 CKLFQ9UBR5 152 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 MGAT4BQ9UQ53 548 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 TMEM5Q9Y2B1 443 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 MAU2Q9Y6X3 613 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 MAGEB3O15480 346 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 GPX3P22352 226 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 CSNK1EP49674 416 aaKnown RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 ATP6AP1Q15904 470 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 SFT2D3Q587I9 215 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 TNFAIP8L3Q5GJ75 292 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 COLEC12Q5KU26 742 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 ENDOVQ8N8Q3 282 aaKnown RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 SERINC2Q96SA4 455 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 LPAR4Q99677 370 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 C20orf27Q9GZN8 174 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 TOR3AQ9H497 397 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 KAT8Q9H7Z6 458 aaKnown RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 CUEDC1Q9NWM3 386 aaPredicted RBP12.89□□□□□ -0.35
PKD1-219ENST00000486339 PCDHGB7Q9Y5F8 929 aa12.89□□□□□ -0.35
PKD1-219ENST00000486339 CABIN1Q9Y6J0 2220 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 SLC9B1P1A6NJY1 282 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 ATP12AP54707 1039 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 PLCXD2Q0VAA5 305 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 OR56A3Q8NH54 315 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 OR52P1PQ8NH57 321 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 S100ZQ8WXG8 99 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 TMEM19Q96HH6 336 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 EGLN2Q96KS0 407 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 GFM1Q96RP9 751 aaKnown RBP12.88□□□□□ -0.35
PKD1-219ENST00000486339 LYSMD1Q96S90 227 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 PALMDQ9NP74 551 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 GPR45Q9Y5Y3 372 aa12.88□□□□□ -0.35
PKD1-219ENST00000486339 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
PKD1-219ENST00000486339 SCN4AP35499 1836 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms