RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CLCF1Q9UBD9 225 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 CNOT11Q9UKZ1 510 aaKnown RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 DTX4Q9Y2E6 619 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 CHCHD2Q9Y6H1 151 aaPredicted RBP7.49□□□□□ -1.21
XRN1-212ENST00000486211 IKBKGQ9Y6K9 419 aa7.49□□□□□ -1.21
XRN1-212ENST00000486211 NINQ8N4C6 2090 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 hCG_1818297A0A087WSY0 165 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 C4orf51C9J302 202 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 H7C0C1 242 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 NDUFS4O43181 175 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 LRATO95237 230 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 ACSL3O95573 720 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 H2AFZP0C0S5 128 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 CYP4B1P13584 511 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 CHRM3P20309 590 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 RPS3P23396 243 aaKnown RBP eCLIP7.48□□□□□ -1.21
XRN1-212ENST00000486211 IMPA1P29218 277 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 ATP5OP48047 213 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 HNRNPFP52597 415 aaKnown RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 SKP1P63208 163 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 TBL3Q12788 808 aaKnown RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 GAB1Q13480 694 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 PWP1Q13610 501 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 ELAVL1Q15717 326 aaKnown RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 PDCD2Q16342 344 aaPredicted RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 MPEG1Q2M385 716 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 FASTKD1Q53R41 847 aaKnown RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 ACSBG2Q5FVE4 666 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 TSTD2Q5T7W7 516 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 THEMIS2Q5TEJ8 643 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 FNDC7Q5VTL7 733 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 CYB5R2Q6BCY4 276 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 NIPAL1Q6NVV3 410 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 CLEC17AQ6ZS10 378 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 H2AFVQ71UI9 128 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 CA13Q8N1Q1 262 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 RFLNBQ8N5W9 214 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 OR10H5Q8NGA6 315 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 LILRB1Q8NHL6 650 aaPredicted RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 UTP15Q8TED0 518 aaKnown RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 PTPMT1Q8WUK0 201 aaPredicted RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 AKAP1Q92667 903 aaKnown RBP eCLIP7.48□□□□□ -1.21
XRN1-212ENST00000486211 CAVIN3Q969G5 261 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 SPACA9Q96E40 222 aaPredicted RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 JSRP1Q96MG2 331 aaPredicted RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 BIRC8Q96P09 236 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 PPP1R2P1Q96PQ5 205 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 FAM111AQ96PZ2 611 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 RHBGQ9H310 441 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 SRA1Q9HD15 236 aaKnown RBP7.48□□□□□ -1.21
XRN1-212ENST00000486211 ARMCX1Q9P291 453 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 GALPQ9UBC7 116 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 LIPT1Q9Y234 373 aa7.48□□□□□ -1.21
XRN1-212ENST00000486211 CTAGE15A4D2H0 777 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 C16orf97H3BN30 126 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 GFYI3L273 518 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 PSMD12O00232 456 aaPredicted RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 UBFD1O14562 309 aaKnown RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 TCF21O43680 179 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 NIPSNAP2O75323 286 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 AVILO75366 819 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 TRAPPC6AO75865 159 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 CATP04040 527 aaKnown RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 SMIM10L1P0DMW3 83 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 POU2F1P14859 743 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 CPN1P15169 458 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 PPARGP37231 505 aaPredicted RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 SKIV2L2P42285 1042 aaKnown RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 SLC6A12P48065 614 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 NAGLUP54802 743 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 HSD17B7P56937 341 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 UBE2HP62256 183 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 TBPL1P62380 186 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 EEF1A1P68104 462 aaKnown RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 ASPHQ12797 758 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 BMPR2Q13873 1038 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 SQLEQ14534 574 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 KLHL38Q2WGJ6 581 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 BBS9Q3SYG4 887 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 EIPR1Q53HC9 387 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 AARS2Q5JTZ9 985 aaKnown RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 EEF1A1P5Q5VTE0 462 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 ANKRD34AQ69YU3 496 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 ADAM5Q6NVV9 412 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 VWA1Q6PCB0 445 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 KIAA1328Q86T90 577 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 CTAGE6Q86UF2 777 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 TMEM132CQ8N3T6 1108 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 MORN4Q8NDC4 146 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 OR10G3Q8NGC4 313 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 NT5CQ8TCD5 201 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 ABTB1Q969K4 478 aaPredicted RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 SMIM10Q96HG1 83 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 ZNF597Q96LX8 424 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 RHNO1Q9BSD3 238 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 DOHHQ9BU89 302 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 AICDAQ9GZX7 198 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 OPN3Q9H1Y3 402 aaPredicted RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms