RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 A0A0G2JMM0 328 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 A0A1W2PPB8 328 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 A0A1W2PRS3 328 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 KIR3DP1A8MWS1 328 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 NPIPA2E9PIF3 369 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 NPIPA3F8WFD2 350 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 P04436 131 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 MTHFD2P13995 350 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 PIK3CBP42338 1070 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 NR0B1P51843 470 aaKnown RBP15.87■□□□□ 0.13
SMC4-216ENST00000485645 IGLV3-21P80748 117 aaPredicted RBP15.87■□□□□ 0.13
SMC4-216ENST00000485645 TRADDQ15628 312 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 FAM83EQ2M2I3 478 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 MPEG1Q2M385 716 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 GXYLT1Q4G148 440 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 ZDHHC24Q6UX98 284 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 FAM47EQ6ZV65 393 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 CCDC91Q7Z6B0 441 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 MYLK4Q86YV6 388 aaPredicted RBP15.87■□□□□ 0.13
SMC4-216ENST00000485645 RNF175Q8N4F7 328 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 ACBD4Q8NC06 268 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 RHEBL1Q8TAI7 183 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 KCTD4Q8WVF5 259 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 RBM18Q96H35 190 aaKnown RBP15.87■□□□□ 0.13
SMC4-216ENST00000485645 SENP5Q96HI0 755 aaPredicted RBP15.87■□□□□ 0.13
SMC4-216ENST00000485645 SORBS1Q9BX66 1292 aaKnown RBP15.87■□□□□ 0.13
SMC4-216ENST00000485645 RPF2Q9H7B2 306 aaKnown RBP15.87■□□□□ 0.13
SMC4-216ENST00000485645 IL1RL2Q9HB29 575 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 PHF11Q9UIL8 331 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 PCDHGA11Q9Y5H2 935 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 TACC2O95359 2948 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 AKAP9Q99996 3911 aa15.87■□□□□ 0.13
SMC4-216ENST00000485645 A0A087X1B8 175 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 CCDC189A1A4V9 331 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 ZNF354AO60765 605 aaPredicted RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 GLSO94925 669 aaPredicted RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 GFAPP14136 432 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 POU3F2P20265 443 aaPredicted RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 CHRNB4P30926 498 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 TLX1P31314 330 aaPredicted RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 IRF9Q00978 393 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 PLIN5Q00G26 463 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 ASPHQ12797 758 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 PIGGQ5H8A4 983 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 EMC4Q5J8M3 183 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 MROH9Q5TGP6 573 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 LIPJQ5W064 366 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 GPR180Q86V85 440 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 CENPLQ8N0S6 344 aaPredicted RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 FAM109AQ8N4B1 249 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 LILRB4Q8NHJ6 448 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 NUBPLQ8TB37 319 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 TANKQ92844 425 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 PPWD1Q96BP3 646 aaKnown RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 ART5Q96L15 291 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 C16orf45Q96MC5 204 aaPredicted RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 MTERF1Q99551 399 aaKnown RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 ACTR8Q9H981 624 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 DMRT3Q9NQL9 472 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 RNF6Q9Y252 685 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 TSC22D4Q9Y3Q8 395 aa15.86■□□□□ 0.13
SMC4-216ENST00000485645 TEP1Q99973 2627 aaKnown RBP15.86■□□□□ 0.13
SMC4-216ENST00000485645 OR14I1A6ND48 311 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 PLPP1O14494 284 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 BCKDKO14874 412 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 IGHG3P01860 377 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 IGKV3-11P04433 115 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 C2P06681 752 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 CCL3P10147 92 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 CAPN3P20807 821 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 PTX3P26022 381 aaPredicted RBP15.85■□□□□ 0.13
SMC4-216ENST00000485645 BUD31P41223 144 aaPredicted RBP15.85■□□□□ 0.13
SMC4-216ENST00000485645 MAGEA5P43359 124 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 DNASE1L1P49184 302 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 ARFIP1P53367 373 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 PHEXP78562 749 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 TNFRSF17Q02223 184 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 GUCY2DQ02846 1103 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 FOLH1Q04609 750 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 TLE4Q04727 773 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 PMPCAQ10713 525 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 SETDB1Q15047 1291 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 ACAP2Q15057 778 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 PFKFB4Q16877 469 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 C18orf63Q68DL7 685 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 ACAD11Q709F0 780 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 ZNF572Q7Z3I7 529 aaPredicted RBP15.85■□□□□ 0.13
SMC4-216ENST00000485645 ZCCHC7Q8N3Z6 543 aaKnown RBP15.85■□□□□ 0.13
SMC4-216ENST00000485645 RPRMLQ8N4K4 120 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 TMEM251Q8N6I4 163 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 OR5M3Q8NGP4 307 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 SLC22A8Q8TCC7 542 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 REPS1Q96D71 796 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 MRRFQ96E11 262 aaKnown RBP15.85■□□□□ 0.13
SMC4-216ENST00000485645 SMC6Q96SB8 1091 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 TREX2Q9BQ50 279 aaPredicted RBP15.85■□□□□ 0.13
SMC4-216ENST00000485645 ITGB1BP2Q9UKP3 347 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 ATG4BQ9Y4P1 393 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 POLQO75417 2590 aa15.85■□□□□ 0.13
SMC4-216ENST00000485645 PHF3Q92576 2039 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms