RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 TTTY12Q9BZ98 90 aa19.97■□□□□ 0.79
USP40-215ENST00000484528 ACTR8Q9H981 624 aa19.97■□□□□ 0.79
USP40-215ENST00000484528 PLSCR2Q9NRY7 297 aa19.97■□□□□ 0.79
USP40-215ENST00000484528 COPS7AQ9UBW8 275 aa19.97■□□□□ 0.79
USP40-215ENST00000484528 NINQ8N4C6 2090 aa19.97■□□□□ 0.79
USP40-215ENST00000484528 FREM3P0C091 2139 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 A0A087X1B8 175 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 SYCE1LA8MT33 242 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 ACOT7O00154 380 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 HRKO00198 91 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 PLPP1O14494 284 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 COX7A2P14406 83 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 HNRNPH2P55795 449 aaKnown RBP19.96■□□□□ 0.79
USP40-215ENST00000484528 RPS13P62277 151 aaKnown RBP19.96■□□□□ 0.79
USP40-215ENST00000484528 FAM83EQ2M2I3 478 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 ARHGAP11AQ6P4F7 1023 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 RTL4Q6ZR62 310 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 RGMAQ96B86 450 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 LURAP1Q96LR2 239 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 DGAT2Q96PD7 388 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 RPF2Q9H7B2 306 aaKnown RBP19.96■□□□□ 0.79
USP40-215ENST00000484528 COQ3Q9NZJ6 369 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 CPSF2Q9P2I0 782 aaKnown RBP19.96■□□□□ 0.79
USP40-215ENST00000484528 LIPGQ9Y5X9 500 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 F8P00451 2351 aa19.96■□□□□ 0.79
USP40-215ENST00000484528 CCL3P10147 92 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 STT3AP46977 705 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 DNASE1L1P49184 302 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 IGLV3-21P80748 117 aaPredicted RBP19.95■□□□□ 0.78
USP40-215ENST00000484528 TNFRSF17Q02223 184 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 FOLH1Q04609 750 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 PCDH1Q08174 1060 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 ASPHQ12797 758 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 C8orf74Q6P047 294 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 OR8K3Q8NH51 312 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 RHEBL1Q8TAI7 183 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 ZDHHC18Q9NUE0 388 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 ATG4BQ9Y4P1 393 aa19.95■□□□□ 0.78
USP40-215ENST00000484528 A0A096LPK6 155 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 WASHC1A8K0Z3 465 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 NPIPA2E9PIF3 369 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 NPIPA3F8WFD2 350 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 SIX3O95343 332 aaPredicted RBP19.94■□□□□ 0.78
USP40-215ENST00000484528 ELAVL4P26378 380 aaKnown RBP19.94■□□□□ 0.78
USP40-215ENST00000484528 PIK3CBP42338 1070 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 PIK3CGP48736 1102 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 CPSF6Q16630 551 aaKnown RBP eCLIP19.94■□□□□ 0.78
USP40-215ENST00000484528 EMC4Q5J8M3 183 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 OPN5Q6U736 354 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 GK5Q6ZS86 529 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 FAM47EQ6ZV65 393 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 ZNF572Q7Z3I7 529 aaPredicted RBP19.94■□□□□ 0.78
USP40-215ENST00000484528 GPR180Q86V85 440 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 C9orf40Q8IXQ3 194 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 OR5L2Q8NGL0 311 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 SENP5Q96HI0 755 aaPredicted RBP19.94■□□□□ 0.78
USP40-215ENST00000484528 FAM173AQ9BQD7 235 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 CENPKQ9BS16 269 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 LRRC1Q9BTT6 524 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 TP63Q9H3D4 680 aaPredicted RBP19.94■□□□□ 0.78
USP40-215ENST00000484528 ADGRE2Q9UHX3 823 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 PHF11Q9UIL8 331 aa19.94■□□□□ 0.78
USP40-215ENST00000484528 GLOD5A6NK44 160 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 FAM90A27PA6NNH2 459 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 EEDO75530 441 aaKnown RBP19.93■□□□□ 0.78
USP40-215ENST00000484528 KLHL2O95198 593 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 ALDOAP04075 364 aaKnown RBP19.93■□□□□ 0.78
USP40-215ENST00000484528 CNR1P21554 472 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 MAGEA5P43359 124 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 ALDH18A1P54886 795 aaKnown RBP19.93■□□□□ 0.78
USP40-215ENST00000484528 PLIN5Q00G26 463 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 GTF2H2Q13888 395 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 ACAP2Q15057 778 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 LIPJQ5W064 366 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 GTF2H2CQ6P1K8 395 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 PAOXQ6QHF9 649 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 MEX3BQ6ZN04 569 aaKnown RBP19.93■□□□□ 0.78
USP40-215ENST00000484528 GOLGA7Q7Z5G4 137 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 SLC22A16Q86VW1 577 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 TMEM251Q8N6I4 163 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 OR5M9Q8NGP3 310 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 CNPPD1Q9BV87 410 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 ZNF717Q9BY31 904 aaPredicted RBP19.93■□□□□ 0.78
USP40-215ENST00000484528 VPS11Q9H270 941 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 IPPKQ9H8X2 491 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 ZDHHC11Q9H8X9 412 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 SACM1LQ9NTJ5 587 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 MS4A12Q9NXJ0 267 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 TUBA8Q9NY65 449 aaPredicted RBP19.93■□□□□ 0.78
USP40-215ENST00000484528 NINJ2Q9NZG7 142 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 TNFRSF10DQ9UBN6 386 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 RNF11Q9Y3C5 154 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 PCDHGA11Q9Y5H2 935 aa19.93■□□□□ 0.78
USP40-215ENST00000484528 TMPRSS11DO60235 418 aa19.92■□□□□ 0.78
USP40-215ENST00000484528 GLSO94925 669 aaPredicted RBP19.92■□□□□ 0.78
USP40-215ENST00000484528 IGKV3-11P04433 115 aa19.92■□□□□ 0.78
USP40-215ENST00000484528 P04436 131 aa19.92■□□□□ 0.78
USP40-215ENST00000484528 CELA3AP09093 270 aa19.92■□□□□ 0.78
USP40-215ENST00000484528 ALOX15P16050 662 aaPredicted RBP19.92■□□□□ 0.78
USP40-215ENST00000484528 TYK2P29597 1187 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms