RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 FAM199XQ6PEV8 388 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CYP2R1Q6VVX0 501 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PAGE2Q7Z2X7 111 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PRSS42Q7Z5A4 293 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 R3HCC1LQ7Z5L2 792 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 AMIGO1Q86WK6 493 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PTRH1Q86Y79 214 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 LRRC56Q8IYG6 542 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ADGRF3Q8IZF5 1079 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 DTWD1Q8N5C7 304 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 KRTCAP2Q8N6L1 136 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 C1orf52Q8N6N3 182 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 IL22RA1Q8N6P7 574 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 LINC01555Q8NAE3 123 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ICA1LQ8NDH6 482 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 TTLQ8NG68 377 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CDC26Q8NHZ8 85 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CHTF18Q8WVB6 975 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 GTF2H4Q92759 462 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 EXTL1Q92935 676 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PPWD1Q96BP3 646 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 QRFPRQ96P65 431 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CCNL2Q96S94 520 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 MENTQ9BUN1 341 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 THUMPD3Q9BV44 507 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ACAT2Q9BWD1 397 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ULBP3Q9BZM4 244 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 FAM60AQ9NP50 221 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 DMRT3Q9NQL9 472 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ATAD3AQ9NVI7 634 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 FAM120CQ9NX05 1096 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CMTM6Q9NX76 183 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ACTR10Q9NZ32 417 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PILRAQ9UKJ1 303 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 POMT2Q9UKY4 750 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PPT2Q9UMR5 302 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 DLGAP4Q9Y2H0 992 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PCM1Q15154 2024 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 TNRC6AQ8NDV7 1962 aaKnown RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 A0A096LPI6 279 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 TCRBV3S1A0A5B6 114 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 DHRS12A0PJE2 317 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 TLCD2A6NGC4 264 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 H3BNX3 289 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 K7ENP7 123 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 CASQ2O14958 399 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 HNRNPRO43390 633 aaKnown RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 AKAP10O43572 662 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 PEX1O43933 1283 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 C1QL1O75973 258 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 SEMA3DO95025 777 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 TGFB1P01137 390 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 RPSAP08865 295 aaKnown RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 CHRM5P08912 532 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 PPIBP23284 216 aaKnown RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 HRH2P25021 359 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 GSTM2P28161 218 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 SHMT2P34897 504 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 C21orf58P58505 322 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 ABATP80404 500 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 PLIN5Q00G26 463 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF763Q0D2J5 394 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 SLC9A5Q14940 896 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 CLPPQ16740 277 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 LINC01559Q495D7 138 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 RABL3Q5HYI8 236 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 CPTPQ5TA50 214 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 BROXQ5VW32 411 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 ARMC6Q6NXE6 501 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 GALNT18Q6P9A2 607 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 INO80CQ6PI98 192 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 IZUMO2Q6UXV1 221 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 CEACAM20Q6UY09 585 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 DLEU7Q6UYE1 221 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 GPR155Q7Z3F1 870 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 ADCK2Q7Z695 626 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 SPPL2CQ8IUH8 684 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 RBM12BQ8IXT5 1001 aaKnown RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 RNF175Q8N4F7 328 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF511Q8NB15 262 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 SLC38A9Q8NBW4 561 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 ADCY4Q8NFM4 1077 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 ABHD11Q8NFV4 315 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 OR2T12Q8NG77 320 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 OR8J2Q8NGG1 315 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 OR2L8Q8NGY9 312 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 OR1L3Q8NH93 324 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 FLVCR1-AS1Q8TAF5 88 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 NRG4Q8WWG1 115 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 KLHL6Q8WZ60 621 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 SLC22A18Q96BI1 424 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 DUS3LQ96G46 650 aaKnown RBP6.57□□□□□ -1.36
BRCA1-216ENST00000484087 ZDHHC12Q96GR4 267 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 SLC45A3Q96JT2 553 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 SLC41A2Q96JW4 573 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 NSMCE2Q96MF7 247 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 FCRL4Q96PJ5 515 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 PANX1Q96RD7 426 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 DPYSL5Q9BPU6 564 aa6.57□□□□□ -1.36
BRCA1-216ENST00000484087 DDA1Q9BW61 102 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms