RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 SHROOM1Q2M3G4 852 aaPredicted RBP3.21□□□□□ -1.9
UBE2F-221ENST00000480828 CCDC57Q2TAC2 916 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 WDR38Q5JTN6 314 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 DCAF12Q5T6F0 453 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 PMF1Q6P1K2 205 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 ARHGAP11AQ6P4F7 1023 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 RFPL4BQ6ZWI9 263 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 ZNF679Q8IYX0 411 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 ELMOD1Q8N336 334 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 CIARTQ8N365 385 aaPredicted RBP3.21□□□□□ -1.9
UBE2F-221ENST00000480828 CCDC185Q8N715 623 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 ZNF397Q8NF99 534 aaPredicted RBP3.21□□□□□ -1.9
UBE2F-221ENST00000480828 TMEM37Q8WXS4 190 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 OSTF1Q92882 214 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 SCRN2Q96FV2 425 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 SENP5Q96HI0 755 aaPredicted RBP3.21□□□□□ -1.9
UBE2F-221ENST00000480828 RAB40CQ96S21 281 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 GPA33Q99795 319 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 LRRCC1Q9C099 1032 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 FAM49AQ9H0Q0 323 aaPredicted RBP3.21□□□□□ -1.9
UBE2F-221ENST00000480828 EVA1AQ9H8M9 152 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 S100A14Q9HCY8 104 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 TAAR2Q9P1P5 351 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 LHX3Q9UBR4 397 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 MIOXQ9UGB7 285 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 BCAP29Q9UHQ4 241 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 B9D1Q9UPM9 204 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 NAALAD2Q9Y3Q0 740 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 RAD54L2Q9Y4B4 1467 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 IGHV4-61A0A0C4DH41 118 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 A0A1W2PS18 150 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 RNF222A6NCQ9 220 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ASB14A6NK59 587 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 LMO7DNF2Z398 122 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 SH2D1BO14796 132 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 SIGLEC5O15389 551 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 CIDEAO60543 219 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 TBX19O60806 448 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 TM7SF2O76062 418 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 GOT2P00505 430 aaKnown RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 HPRP00739 348 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 IGHV4-59P01825 116 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 APRTP07741 180 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 LYNP07948 512 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 TSPAN8P19075 237 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 GDI1P31150 447 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 DSCR9P59020 149 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 HERV-K104P61576 105 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 BEX3Q00994 111 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 MFGE8Q08431 387 aaPredicted RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ZSWIM7Q19AV6 140 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 LRRC23Q53EV4 343 aaPredicted RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 PDLIM3Q53GG5 364 aaPredicted RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 SPANXN4Q5MJ08 99 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 RABGAP1LQ5R372 815 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 LEKR1Q6ZMV7 388 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 Q71RC1 249 aaPredicted RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 C16orf82Q7Z2V1 217 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 LHFPL4Q7Z7J7 247 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ITIH5Q86UX2 942 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 DND1Q8IYX4 353 aaKnown RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 FAM89BQ8N5H3 189 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 IQCF1Q8N6M8 205 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 EIF1ADQ8N9N8 165 aaKnown RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 COLGALT1Q8NBJ5 622 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 STEAP2Q8NFT2 490 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 OR2T11Q8NH01 316 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 HPSE2Q8WWQ2 592 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 FCAMRQ8WWV6 532 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 MRPL24Q96A35 216 aaKnown RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 TUBGCP3Q96CW5 907 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ZNF479Q96JC4 524 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 C2orf48Q96LS8 159 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 PSKH2Q96QS6 385 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ACCSQ96QU6 501 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 TESK2Q96S53 571 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 SECISBP2Q96T21 854 aaKnown RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 KRT12Q99456 494 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 IL12RB2Q99665 862 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 NDUFAF3Q9BU61 184 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 GON7Q9BXV9 100 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 VCX2Q9H322 139 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 VIPAS39Q9H9C1 493 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 SIX2Q9NPC8 291 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 GDF3Q9NR23 364 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 GDAP2Q9NXN4 497 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 EPHA6Q9UF33 1036 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ATP6V1HQ9UI12 483 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ELF5Q9UKW6 265 aaPredicted RBP3.2□□□□□ -1.9
UBE2F-221ENST00000480828 GRID1Q9ULK0 1009 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 ZNF175Q9Y473 711 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 SPATA31D1Q6ZQQ2 1576 aa3.2□□□□□ -1.9
UBE2F-221ENST00000480828 UMODL1Q5DID0 1318 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 NISCHQ9Y2I1 1504 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 C15orf38-AP3S2A0A0A6YYH1 394 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 PLSCR5A0PG75 271 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 ZSCAN5BA6NJL1 495 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 CCDC169A6NNP5 214 aa3.19□□□□□ -1.9
UBE2F-221ENST00000480828 A8MUI8 341 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms