RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 DNAJB6O75190 326 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 P04436 131 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 RNF224P0DH78 156 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 ALOX15P16050 662 aaPredicted RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 PTGS2P35354 604 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 RNF4P78317 190 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 PSPHP78330 225 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 RPP38P78345 283 aaKnown RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 CPSF6Q16630 551 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCM2-213ENST00000480658 FBXO48Q5FWF7 155 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 TBCELQ5QJ74 424 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 FRG2Q64ET8 278 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 ZNF793Q6ZN11 406 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 GOLGA7Q7Z5G4 137 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 TICAM1Q8IUC6 712 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 TAGAPQ8N103 731 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 C17orf53Q8N3J3 647 aaPredicted RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 CPSF7Q8N684 471 aaKnown RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 PTGR2Q8N8N7 351 aaPredicted RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 TRPC4APQ8TEL6 797 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 PTPMT1Q8WUK0 201 aaPredicted RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 MRRFQ96E11 262 aaKnown RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 DTNBP1Q96EV8 351 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 FRG2BQ96QU4 278 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 RASL10BQ96S79 203 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 MTERF1Q99551 399 aaKnown RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 MAPKAP1Q9BPZ7 522 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 FAM173AQ9BQD7 235 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 TP63Q9H3D4 680 aaPredicted RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 DDX31Q9H8H2 851 aaKnown RBP10.64□□□□□ -0.71
CCM2-213ENST00000480658 BRF2Q9HAW0 419 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 SLC24A3Q9HC58 644 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 SACM1LQ9NTJ5 587 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 XPR1Q9UBH6 696 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 SNX6Q9UNH7 406 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 CFL2Q9Y281 166 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 MEMO1Q9Y316 297 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 CLDN16Q9Y5I7 305 aa10.64□□□□□ -0.71
CCM2-213ENST00000480658 SPTBN1Q01082 2364 aaKnown RBP10.63□□□□□ -0.71
CCM2-213ENST00000480658 HMX2A2RU54 273 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 GOLGA6L10A6NI86 522 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 H3BQF6 201 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 PROM1O43490 865 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 MAN1A2O60476 641 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 PRAMEF4O60810 478 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 LDB3O75112 727 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 CDH16O75309 829 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 GPR75O95800 540 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 HSD3B1P14060 373 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 HSD3B2P26439 372 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 HNRNPFP52597 415 aaKnown RBP10.63□□□□□ -0.71
CCM2-213ENST00000480658 IRF9Q00978 393 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 PLGLB1Q02325 96 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 FOLH1Q04609 750 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 TRADDQ15628 312 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 ZNF630Q2M218 657 aaPredicted RBP10.63□□□□□ -0.71
CCM2-213ENST00000480658 PRAMEF9Q5VWM5 478 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 ADNP2Q6IQ32 1131 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 UBE3DQ7Z6J8 389 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 SULF2Q8IWU5 870 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 TMEM52Q8NDY8 209 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 WDR20Q8TBZ3 569 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 ACMSDQ8TDX5 336 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 ITLN2Q8WWU7 325 aaPredicted RBP10.63□□□□□ -0.71
CCM2-213ENST00000480658 RIT1Q92963 219 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 CCDC126Q96EE4 140 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 SCYL1Q96KG9 808 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 GPR78Q96P69 363 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 C1QTNF3Q9BXJ4 246 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 HES7Q9BYE0 225 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 OR51B5Q9H339 312 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 NOL11Q9H8H0 719 aaKnown RBP10.63□□□□□ -0.71
CCM2-213ENST00000480658 CNIH4Q9P003 139 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 B4GALT7Q9UBV7 327 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 PSME2Q9UL46 239 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 ASB1Q9Y576 335 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 POLEQ07864 2286 aa10.63□□□□□ -0.71
CCM2-213ENST00000480658 SCN3AQ9NY46 2000 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 HIVEP3Q5T1R4 2406 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 A0A0A6YYD5 115 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 FIGNL2A6NMB9 653 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 BCKDKO14874 412 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 FGF17O60258 216 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 CLDN14O95500 239 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 KRT6AP02538 564 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 KRT6BP04259 564 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 FAM58BPP0C7Q3 252 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 SLC35E2P0CK97 266 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 PIK3R1P27986 724 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 SERPINB3P29508 390 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 GSTM5P46439 218 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 KRT6CP48668 564 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 HK2P52789 917 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 NRG3P56975 720 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 RPS13P62277 151 aaKnown RBP10.62□□□□□ -0.71
CCM2-213ENST00000480658 ZNF468Q5VIY5 522 aaPredicted RBP10.62□□□□□ -0.71
CCM2-213ENST00000480658 RNF111Q6ZNA4 994 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 ACAD11Q709F0 780 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 GDF7Q7Z4P5 450 aa10.62□□□□□ -0.71
CCM2-213ENST00000480658 MILR1Q7Z6M3 343 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms