RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PCBP4P57723 403 aaKnown RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 SELENBP1Q13228 472 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 NFE2L1Q14494 772 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 TMEM52BQ4KMG9 183 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 GPR32P1Q8NGA4 272 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 OR8D1Q8WZ84 308 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 ZNF354BQ96LW1 612 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 NUAK2Q9H093 628 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 ADAM29Q9UKF5 820 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 TRAPPC4Q9Y296 219 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 MTCL1Q9Y4B5 1905 aaKnown RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 LZTS3O60299 673 aaPredicted RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 DLGAP3O95886 979 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 BCHEP06276 602 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 H1F0P07305 194 aaKnown RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 CCL5P13501 91 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 ELAVL4P26378 380 aaKnown RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 WEE1P30291 646 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 KCNJ5P48544 419 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 CRISP3P54108 245 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 MLC1Q15049 377 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 SOWAHCQ53LP3 525 aaPredicted RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 TCTN3Q6NUS6 607 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 C11orf96Q7Z7L8 435 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 ADGRF3Q8IZF5 1079 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 MRPL43Q8N983 215 aaKnown RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 RNF167Q9H6Y7 350 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 ACSS1Q9NUB1 689 aaPredicted RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 RHCGQ9UBD6 479 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 LSM2Q9Y333 95 aaKnown RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 RPL36Q9Y3U8 105 aaKnown RBP23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 SNPHO15079 494 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 ENTPD6O75354 484 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 ADH5P11766 374 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 TIE1P35590 1138 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 ALDH6A1Q02252 535 aaKnown RBP23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 SSX1Q16384 188 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 OCLNQ16625 522 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 C6orf120Q7Z4R8 191 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 AKAP14Q86UN6 197 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 HEATR4Q86WZ0 1026 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 MMP21Q8N119 569 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 ZNF366Q8N895 744 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 FAM83FQ8NEG4 500 aaPredicted RBP23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 OR8J1Q8NGP2 316 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 HTRA1Q92743 480 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 ARRDC3Q96B67 414 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 ZBED6CLQ96FA7 236 aaPredicted RBP23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 TMEM80Q96HE8 168 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 OPALINQ96PE5 141 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 SORBS1Q9BX66 1292 aaKnown RBP23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 SLAMF7Q9NQ25 335 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 TAS2R16Q9NYV7 291 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 PCDHGA4Q9Y5G9 962 aa23.39■■□□□ 1.34
SYNGAP1-206ENST00000479510 EDDM13A0A1B0GTR0 161 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 PDZK1P1A8MUH7 402 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 KIAA0355O15063 1070 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 MYCP01106 439 aaPredicted RBP23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 CYP17A1P05093 508 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 ALOX12P18054 663 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 POU1F1P28069 291 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 SEPHS1P49903 392 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 LINC00471Q8N535 108 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 LMNTD1Q8N9Z9 388 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 SMPDL3AQ92484 453 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 SACM1LQ9NTJ5 587 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 ZSCAN32Q9NX65 697 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 QPCTLQ9NXS2 382 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 SEC14L4Q9UDX3 406 aa23.39■■□□□ 1.33
SYNGAP1-206ENST00000479510 KIAA1549LQ6ZVL6 1849 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 TBX6O95947 436 aaPredicted RBP23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 ADH1CP00326 375 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 APOA1P02647 267 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 ADRA2AP08913 450 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 FUT4P22083 530 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 HNRNPA1L2Q32P51 320 aaKnown RBP23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 SLC25A30Q5SVS4 291 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 CASP12Q6UXS9 341 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 ST13P5Q8NFI4 369 aaPredicted RBP23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 FUZQ9BT04 418 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 MND1Q9BWT6 205 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 ROGDIQ9GZN7 287 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 PRDM8Q9NQV8 689 aa23.38■■□□□ 1.33
SYNGAP1-206ENST00000479510 KCNK2O95069 426 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 HNRNPA1P09651 372 aaKnown RBP eCLIP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 ADRB3P13945 408 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 CSF2RAP15509 400 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 CCR8P51685 355 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 TPTEP56180 551 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 ERVFC1P60507 584 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 TRA2BP62995 288 aaKnown RBP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 REEP5Q00765 189 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 NDUFA9Q16795 377 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 RPS26P11Q5JNZ5 115 aaPredicted RBP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 C9orf64Q5T6V5 341 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 TNFAIP8L2Q6P589 184 aaPredicted RBP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 CD300LDQ6UXZ3 194 aa23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 FAM83HQ6ZRV2 1179 aaPredicted RBP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 ERN2Q76MJ5 926 aaKnown RBP23.37■■□□□ 1.33
SYNGAP1-206ENST00000479510 NLGN4XQ8N0W4 816 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms