RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MTX2O75431 263 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 AKR7A3O95154 331 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 LUC7L3O95232 432 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 AHSA1O95433 338 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TGFAP01135 160 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CLEC3BP05452 202 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 MMP2P08253 660 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GATA1P15976 413 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 NT5EP21589 574 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CMA1P23946 247 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ABCD3P28288 659 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 LCN1P31025 176 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 NUDT1P36639 197 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PSMB10P40306 273 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 SLC1A1P43005 524 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 SLC1A6P48664 564 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 KHKP50053 298 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 SMSP52788 366 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 NDST2P52849 883 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PLK1P53350 603 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CDH4P55283 916 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PRMT2P55345 433 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CLDN8P56748 225 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 RAB4BP61018 213 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 MAT1AQ00266 395 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 CYP24A1Q07973 514 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 RASGEF1BQ0VAM2 473 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GAGE5Q13069 117 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GAGE6Q13070 117 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 SRSF5Q13243 272 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 NAB1Q13506 487 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ENPP2Q13822 863 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GAMTQ14353 236 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GCKRQ14397 625 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ZNF234Q14588 700 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 IRF3Q14653 427 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TSC22D1Q15714 1073 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TBCEQ15813 527 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 BAK1Q16611 211 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 HKDC1Q2TB90 917 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 LACTB2Q53H82 288 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 YIF1BQ5BJH7 314 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ANKRD20A8PQ5CZ79 823 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CMPK2Q5EBM0 449 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ZNF311Q5JNZ3 666 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TEX30Q5JUR7 227 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CDKL4Q5MAI5 379 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 BRMS1LQ5PSV4 323 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PIP5KL1Q5T9C9 394 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ARHGEF16Q5VV41 709 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TTC33Q6PID6 262 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 C4orf22Q6V702 233 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ERN2Q76MJ5 926 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 TRPM8Q7Z2W7 1104 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 MIER3Q7Z3K6 550 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 DCXRQ7Z4W1 244 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GPAT4Q86UL3 456 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TAC4Q86UU9 113 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ITIH5Q86UX2 942 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 HIPK1Q86Z02 1210 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ZCCHC9Q8N567 271 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 CPSF7Q8N684 471 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 ZNF781Q8N8C0 355 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CEP112Q8N8E3 955 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 FNDC5Q8NAU1 212 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 DDHD1Q8NEL9 900 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 C17orf47Q8NEP4 570 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 STEAP2Q8NFT2 490 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OR5M1Q8NGP8 315 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OR2T3Q8NH03 318 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OR52N1Q8NH53 320 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OR2T6Q8NHC8 308 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 CD300LFQ8TDQ1 290 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PSPC1Q8WXF1 523 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 ROBO4Q8WZ75 1007 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GTF3AQ92664 365 aaKnown RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 CORO2AQ92828 525 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 APBB2Q92870 758 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 PIGTQ969N2 578 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 FBXO32Q969P5 355 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TMEM186Q96B77 213 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 FBXL8Q96CD0 374 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OTUB2Q96DC9 234 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 RNF125Q96EQ8 232 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 APOPT1Q96IL0 206 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ZNF514Q96K75 400 aaPredicted RBP2.31□□□□□ -2.04
XRN1-211ENST00000477237 C18orf12Q96KH6 178 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OLFM3Q96PB7 478 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 VPS35Q96QK1 796 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 SEMA3CQ99985 751 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 NEURL2Q9BR09 285 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 ACBD6Q9BR61 282 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TRIM51Q9BSJ1 452 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.31□□□□□ -2.04
XRN1-211ENST00000477237 IDI2Q9BXS1 227 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 GPR63Q9BZJ6 419 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 HDHD2Q9H0R4 259 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OR52A5Q9H2C5 316 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 TMEM245Q9H330 911 aa2.31□□□□□ -2.04
XRN1-211ENST00000477237 OR51B6Q9H340 312 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms