RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 FRMD7Q6ZUT3 714 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 COMMD6Q7Z4G1 85 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 BEST3Q8N1M1 668 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 KIF2BQ8N4N8 673 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 HORMAD2Q8N7B1 307 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 AGAP11Q8TF27 550 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 CHTF18Q8WVB6 975 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 C19orf60Q96EN9 201 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 SMC6Q96SB8 1091 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 NPAS2Q99743 824 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 PELOQ9BRX2 385 aaKnown RBP12.53□□□□□ -0.4
ACTN4-205ENST00000477174 TRMOQ9BU70 441 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 AGPAT4Q9NRZ5 378 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 SENP1Q9P0U3 644 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 PCDHGB6Q9Y5F9 930 aa12.53□□□□□ -0.4
ACTN4-205ENST00000477174 UBR5O95071 2799 aaPredicted RBP12.53□□□□□ -0.4
ACTN4-205ENST00000477174 TRBV11-1A0A0K0K1C0 115 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 FCHO1O14526 889 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 DYRK3O43781 588 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 PRAMEF2O60811 474 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 MAPK12P53778 367 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 TRA2BP62995 288 aaKnown RBP12.52□□□□□ -0.41
ACTN4-205ENST00000477174 ID2Q02363 134 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 ZNF844Q08AG5 666 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 GALNT1Q10472 559 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-205ENST00000477174 TUBA3CQ13748 450 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 INAQ16352 499 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 KRT71Q3SY84 523 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 PRR30Q53SZ7 412 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-205ENST00000477174 TUBA3EQ6PEY2 450 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 C10orf107Q8IVU9 208 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 OR4N5Q8IXE1 308 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 ST13P4Q8IZP2 240 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-205ENST00000477174 OR8K3Q8NH51 312 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 TCP10LQ8TDR4 215 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 NCLNQ969V3 563 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 DGAT2Q96PD7 388 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 TRIM45Q9H8W5 580 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-205ENST00000477174 ASF1BQ9NVP2 202 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 MAP10Q9P2G4 905 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 TIMM22Q9Y584 194 aa12.52□□□□□ -0.41
ACTN4-205ENST00000477174 MYOCOSA0A1B0GUC4 107 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 GLOD5A6NK44 160 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 GABRR3A8MPY1 467 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 PGRMC2O15173 223 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 RGS16O15492 202 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-205ENST00000477174 MAN1A2O60476 641 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 CRCPO75575 148 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 AIFM1O95831 613 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 DDAH2O95865 285 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 F10P00742 488 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 SLC35E2P0CK97 266 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 ALOX15P16050 662 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-205ENST00000477174 GALNSP34059 522 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 TRHRP34981 398 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-205ENST00000477174 CYB561P49447 251 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 PLIN5Q00G26 463 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 TCHHL1Q5QJ38 904 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-205ENST00000477174 NDUFAF5Q5TEU4 345 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 OR52E8Q6IFG1 317 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 HSDL2Q6YN16 418 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 TRIM46Q7Z4K8 759 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 C1orf52Q8N6N3 182 aaKnown RBP12.51□□□□□ -0.41
ACTN4-205ENST00000477174 OR5L2Q8NGL0 311 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 GRHL3Q8TE85 626 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 FAR1Q8WVX9 515 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 SENP5Q96HI0 755 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-205ENST00000477174 HBEGFQ99075 208 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 ACPTQ9BZG2 426 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 OR8D2Q9GZM6 311 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 ZNF223Q9UK11 482 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-205ENST00000477174 PSME2Q9UL46 239 aa12.51□□□□□ -0.41
ACTN4-205ENST00000477174 YARS2Q9Y2Z4 477 aaKnown RBP12.51□□□□□ -0.41
ACTN4-205ENST00000477174 FLNCQ14315 2725 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 SPENQ96T58 3664 aaKnown RBP12.5□□□□□ -0.41
ACTN4-205ENST00000477174 C1orf226A1L170 272 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 WASHC1A8K0Z3 465 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 TCP11X1B4DZS4 312 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 TYROBPO43914 113 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 SPAG7O75391 227 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 UROSP10746 265 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 CD46P15529 392 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 CHN1P15882 459 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 PIK3R1P27986 724 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 HLCSP50747 726 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 FOXA1P55317 472 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
ACTN4-205ENST00000477174 ACSM2AQ08AH3 577 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 PCLAFQ15004 111 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 OR1C1Q15619 314 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 SPIN4Q56A73 249 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 ZNF766Q5HY98 468 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 ACSM2BQ68CK6 577 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 GALNT18Q6P9A2 607 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 FAM180AQ6UWF9 173 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 BCORP1Q8N888 145 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 MDS2Q8NDY4 140 aa12.5□□□□□ -0.41
ACTN4-205ENST00000477174 OR4K14Q8NGD5 310 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms