RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PSD3Q9NYI0 1048 aa13.96□□□□□ -0.17
SMG5-204ENST00000476954 CNIH4Q9P003 139 aa13.96□□□□□ -0.17
SMG5-204ENST00000476954 VTI1BQ9UEU0 232 aa13.96□□□□□ -0.17
SMG5-204ENST00000476954 INTUQ9ULD6 942 aa13.96□□□□□ -0.17
SMG5-204ENST00000476954 LAMP3Q9UQV4 416 aa13.96□□□□□ -0.17
SMG5-204ENST00000476954 ALPK2Q86TB3 2170 aa13.96□□□□□ -0.18
SMG5-204ENST00000476954 MALRD1Q5VYJ5 2156 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.95□□□□□ -0.18
SMG5-204ENST00000476954 HRKO00198 91 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 CYR61O00622 381 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 ZNF189O75820 626 aaPredicted RBP13.95□□□□□ -0.18
SMG5-204ENST00000476954 ENO3P13929 434 aaPredicted RBP13.95□□□□□ -0.18
SMG5-204ENST00000476954 UGT2B10P36537 528 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 REEP5Q00765 189 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 SRYQ05066 204 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 CTBP1Q13363 440 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 YRDCQ86U90 279 aaKnown RBP13.95□□□□□ -0.18
SMG5-204ENST00000476954 ZNF595Q8IYB9 648 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 CD200R1Q8TD46 325 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 NEIL2Q969S2 332 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 TSNARE1Q96NA8 513 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 KCNK17Q96T54 332 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 TCF12Q99081 682 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 TM9SF2Q99805 663 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 HAUS8Q9BT25 410 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 OPN3Q9H1Y3 402 aaPredicted RBP13.95□□□□□ -0.18
SMG5-204ENST00000476954 SLCO5A1Q9H2Y9 848 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 RAB6BQ9NRW1 208 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 DTX4Q9Y2E6 619 aa13.95□□□□□ -0.18
SMG5-204ENST00000476954 A0A1W2PNV4 684 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 URADA6NGE7 173 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 MSTNO14793 375 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 CTNSO60931 367 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 ADAM11O75078 769 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 LDB3O75112 727 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 NDUFS7O75251 213 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 APRTP07741 180 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 FBXO45P0C2W1 286 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 HNRNPH1P31943 449 aaKnown RBP13.94□□□□□ -0.18
SMG5-204ENST00000476954 IDUAP35475 653 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 FDFT1P37268 417 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 RBBP5Q15291 538 aaKnown RBP13.94□□□□□ -0.18
SMG5-204ENST00000476954 VWA1Q6PCB0 445 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 ADGRE4PQ86SQ3 457 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 TBC1D19Q8N5T2 526 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 ATL1Q8WXF7 558 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 DIO2Q92813 273 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 STARD4Q96DR4 205 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 ZFP3Q96NJ6 502 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 QRFPRQ96P65 431 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 IFNKQ9P0W0 207 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 CLCF1Q9UBD9 225 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 C15orf41Q9Y2V0 281 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 DHRS7Q9Y394 339 aa13.94□□□□□ -0.18
SMG5-204ENST00000476954 EXPH5Q8NEV8 1989 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 H0Y3Z8 333 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 HS3ST1O14792 307 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 KLF4O43474 513 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 TGM6O95932 706 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 THBDP07204 575 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 SERPINA6P08185 405 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 OGNP20774 298 aaKnown RBP13.93□□□□□ -0.18
SMG5-204ENST00000476954 CCND1P24385 295 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 MGAT1P26572 445 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 CDKN1AP38936 164 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 RWDD2BP57060 319 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 RPS4XP62701 263 aaKnown RBP13.93□□□□□ -0.18
SMG5-204ENST00000476954 TBL3Q12788 808 aaKnown RBP13.93□□□□□ -0.18
SMG5-204ENST00000476954 STX4Q12846 297 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 CSHL1Q14406 222 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 BBS9Q3SYG4 887 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 DGAT2L6Q6ZPD8 337 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 DNM1P46Q6ZS02 220 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 IL17RELQ6ZVW7 336 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 CILP2Q8IUL8 1156 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 ZNF611Q8N823 705 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 TRPV3Q8NET8 790 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 NUBPLQ8TB37 319 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 SLC5A11Q8WWX8 675 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 WNT2BQ93097 391 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 FAR2Q96K12 515 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 RILPQ96NA2 401 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 NPLQ9BXD5 320 aaPredicted RBP13.93□□□□□ -0.18
SMG5-204ENST00000476954 FBXO6Q9NRD1 293 aaPredicted RBP13.93□□□□□ -0.18
SMG5-204ENST00000476954 SYBUQ9NX95 663 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 COPS7AQ9UBW8 275 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 MRPS33Q9Y291 106 aaKnown RBP13.93□□□□□ -0.18
SMG5-204ENST00000476954 PCDHA13Q9Y5I0 950 aa13.93□□□□□ -0.18
SMG5-204ENST00000476954 LRRC14BA6NHZ5 514 aa13.92□□□□□ -0.18
SMG5-204ENST00000476954 OVOL3O00110 214 aa13.92□□□□□ -0.18
SMG5-204ENST00000476954 ERI3O43414 337 aaKnown RBP13.92□□□□□ -0.18
SMG5-204ENST00000476954 B3GALT2O43825 422 aa13.92□□□□□ -0.18
SMG5-204ENST00000476954 IFNB1P01574 187 aa13.92□□□□□ -0.18
SMG5-204ENST00000476954 IGHV4-39P01824 125 aa13.92□□□□□ -0.18
SMG5-204ENST00000476954 POU2F1P14859 743 aa13.92□□□□□ -0.18
SMG5-204ENST00000476954 CERS1P27544 350 aa13.92□□□□□ -0.18
SMG5-204ENST00000476954 LIM2P55344 173 aa13.92□□□□□ -0.18
SMG5-204ENST00000476954 DHX9Q08211 1270 aaKnown RBP13.92□□□□□ -0.18
SMG5-204ENST00000476954 UGT3A1Q6NUS8 523 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms