RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 EGLN1Q9GZT9 426 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 PARLQ9H300 379 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 B3GAT2Q9NPZ5 323 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 SOHLH2Q9NX45 425 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 ACTR3BQ9P1U1 418 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 THAP10Q9P2Z0 257 aaPredicted RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 BAIAP2L1Q9UHR4 511 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 HOOK1Q9UJC3 728 aaKnown RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 EXOGQ9Y2C4 368 aaKnown RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 ZHX2Q9Y6X8 837 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 ZMYM6O95789 1325 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 LOC105371242A0A075B767 164 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 YJEFN3A6XGL0 299 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 CHEK1O14757 476 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 B3GALNT1O75752 331 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 FHP07954 510 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 PTPN4P29074 926 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 PRDX6P30041 224 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 MTIF2P46199 727 aaKnown RBP4.97□□□□□ -1.61
VPS50-212ENST00000476413 ZFP36L2P47974 494 aaKnown RBP4.97□□□□□ -1.61
VPS50-212ENST00000476413 SSTP61278 116 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 CALCOCO2Q13137 446 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 ITPK1Q13572 414 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 CMPK2Q5EBM0 449 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 CDC42EP5Q6NZY7 148 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 Q6ZRG5 221 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 CARM1Q86X55 608 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 AQP11Q8NBQ7 271 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 RELL2Q8NC24 303 aaPredicted RBP4.97□□□□□ -1.61
VPS50-212ENST00000476413 OR6F1Q8NGZ6 308 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 GOLGA5Q8TBA6 731 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 DQX1Q8TE96 717 aaKnown RBP4.97□□□□□ -1.61
VPS50-212ENST00000476413 KCNK16Q96T55 309 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 FTHL17Q9BXU8 183 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 PLEKHA3Q9HB20 300 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 GDF3Q9NR23 364 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 CNOT2Q9NZN8 540 aaKnown RBP4.97□□□□□ -1.61
VPS50-212ENST00000476413 MDFICQ9P1T7 246 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 ERRFI1Q9UJM3 462 aaPredicted RBP4.97□□□□□ -1.61
VPS50-212ENST00000476413 KLHDC2Q9Y2U9 406 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 MTF2Q9Y483 593 aaPredicted RBP4.97□□□□□ -1.61
VPS50-212ENST00000476413 KIF7Q2M1P5 1343 aa4.97□□□□□ -1.61
VPS50-212ENST00000476413 ZNF724A8MTY0 619 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 KPNA7A9QM74 516 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 LINC01565O15544 149 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 KIAA0513O60268 411 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 OR6A2O95222 327 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 SYNGR4O95473 234 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 FUT1P19526 365 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 AOC1P19801 751 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 ALDH3B1P43353 468 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 CRYBA2P53672 197 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 ATP12AP54707 1039 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 RBBP4Q09028 425 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 GCKRQ14397 625 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 KARSQ15046 597 aaKnown RBP4.96□□□□□ -1.62
VPS50-212ENST00000476413 P2RY14Q15391 338 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 UPP1Q16831 310 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 KNOP1Q1ED39 458 aaKnown RBP4.96□□□□□ -1.62
VPS50-212ENST00000476413 MTHFSDQ2M296 383 aaKnown RBP4.96□□□□□ -1.62
VPS50-212ENST00000476413 RTL6Q6ICC9 239 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 LCLAT1Q6UWP7 414 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 GDPGP1Q6ZNW5 385 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 RBM43Q6ZSC3 357 aaKnown RBP4.96□□□□□ -1.62
VPS50-212ENST00000476413 CDHR3Q6ZTQ4 885 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 YRDCQ86U90 279 aaKnown RBP4.96□□□□□ -1.62
VPS50-212ENST00000476413 PRSS33Q8NF86 280 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 PNPLA2Q96AD5 504 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 CBWD1Q9BRT8 395 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 DCTN5Q9BTE1 182 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 UBE2TQ9NPD8 197 aaPredicted RBP4.96□□□□□ -1.62
VPS50-212ENST00000476413 NDE1Q9NXR1 346 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 IL20RAQ9UHF4 553 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 RNF215Q9Y6U7 377 aa4.96□□□□□ -1.62
VPS50-212ENST00000476413 TRBV5-4A0A0C4DH59 114 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 RASGRF2O14827 1237 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 ARPC1BO15143 372 aaKnown RBP4.95□□□□□ -1.62
VPS50-212ENST00000476413 INPP4BO15327 924 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 ANXA9O76027 345 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 FCGR2BP31994 310 aaPredicted RBP4.95□□□□□ -1.62
VPS50-212ENST00000476413 FCGR2CP31995 323 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 GPC3P51654 580 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 ERVK-16P61578 105 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 FUT7Q11130 342 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 KIAA0141Q14154 515 aaPredicted RBP4.95□□□□□ -1.62
VPS50-212ENST00000476413 MOGAT2Q3SYC2 334 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 C12orf60Q5U649 245 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 HIST2H2AA3Q6FI13 130 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 FAM159AQ6UWV7 190 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 CATSPER4Q7RTX7 472 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 ZFAND4Q86XD8 727 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 GVQW1Q8N7I0 195 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 MINDY2Q8NBR6 621 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 LEMD2Q8NC56 503 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 ZNF248Q8NDW4 579 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 OR56B1Q8NGI3 324 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 HCAR2Q8TDS4 363 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 SSC4DQ8WTU2 575 aa4.95□□□□□ -1.62
VPS50-212ENST00000476413 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.95□□□□□ -1.62
VPS50-212ENST00000476413 TMEM45BQ96B21 275 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms