RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 CTF1Q16619 201 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 CPSF6Q16630 551 aaKnown RBP eCLIP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC35G1Q2M3R5 365 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 ZNF674Q2M3X9 581 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 RNASE10Q5GAN6 216 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 C9orf152Q5JTZ5 239 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 C10orf120Q5SQS8 335 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 AVPI1Q5T686 147 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 ARL6IP4Q66PJ3 421 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 ARHGAP17Q68EM7 881 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 KDM4DQ6B0I6 523 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 REP15Q6BDI9 236 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 LAMTOR1Q6IAA8 161 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 MAMDC4Q6UXC1 1216 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 ISCA2Q86U28 154 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 LRRC56Q8IYG6 542 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 RDH10Q8IZV5 341 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 LILRA2Q8N149 483 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 STPG2Q8N412 459 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 DNAJC22Q8N4W6 341 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 CELF5Q8N6W0 485 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 YIPF7Q8N8F6 280 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 MFSD9Q8NBP5 474 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 ZMIZ2Q8NF64 920 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 MCFD2Q8NI22 146 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 MRGPRDQ8TDS7 321 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 ADAMTS18Q8TE60 1221 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 CORO2AQ92828 525 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 HAS1Q92839 578 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 MUL1Q969V5 352 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 BIRC7Q96CA5 298 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 CCDC124Q96CT7 223 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 SPACA9Q96E40 222 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 PRR11Q96HE9 360 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 UBXN10Q96LJ8 280 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 ZNF599Q96NL3 588 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 SORCS2Q96PQ0 1159 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 FYTTD1Q96QD9 318 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 RAD9AQ99638 391 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 MAPKAP1Q9BPZ7 522 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 COLEC11Q9BWP8 271 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 GANQ9H2C0 597 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 TMPRSS5Q9H3S3 457 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 TOR3AQ9H497 397 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 SPAG4Q9NPE6 437 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 PLSCR4Q9NRQ2 329 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 GJB4Q9NTQ9 266 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 NSMCE4AQ9NXX6 385 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 SLAMF8Q9P0V8 285 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 PCDHA6Q9UN73 950 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 RPH3ALQ9UNE2 315 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 ING4Q9UNL4 249 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 PLEKHA6Q9Y2H5 1048 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC6A5Q9Y345 797 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 MMACHCQ9Y4U1 282 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 QSER1Q2KHR3 1735 aa5.72□□□□□ -1.49
ECHDC1-215ENST00000475319 USP54Q70EL1 1684 aa5.71□□□□□ -1.49
ECHDC1-215ENST00000475319 IGSF1Q8N6C5 1336 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 LNP1A1A4G5 178 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ASB14A6NK59 587 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PP2D1A8MPX8 630 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 A8MV72 311 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM171A2A8MVW0 826 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ISM1B1AKI9 464 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 AIPO00170 330 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 SURF4O15260 269 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 CTNSO60931 367 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 CREG1O75629 220 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PIAS1O75925 651 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PDE8BO95263 885 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 MT-CYBP00156 380 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 LALBAP00709 142 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 LRG1P02750 347 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 CLTBP09497 229 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 DHRS4L1P0CG22 281 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 TYRP14679 529 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ANXA7P20073 488 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PVALBP20472 110 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 CA5AP35218 305 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 RPA3P35244 121 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 TAGLN2P37802 199 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 MAP3K8P41279 467 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 MAGEA6P43360 314 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 SRP9P49458 86 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 XKP51811 444 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PRPS1P60891 318 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 REEP5Q00765 189 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 SEMG2Q02383 582 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 TFCP2Q12800 502 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 OVGP1Q12889 678 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 TP53BP2Q13625 1128 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC1A5Q15758 541 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 NRF1Q16656 503 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 CYP1B1Q16678 543 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF404Q494X3 552 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 TMEM119Q4V9L6 283 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM69AQ5T7M9 428 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 ATPAF1Q5TC12 328 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 PMF1Q6P1K2 205 aa5.71□□□□□ -1.5
ECHDC1-215ENST00000475319 TAF2Q6P1X5 1199 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms