RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 DLX3O60479 287 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 SEMA3DO95025 777 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 SHBGP04278 402 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 FAM58BPP0C7Q3 252 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 TAC1P20366 129 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 TLX1P31314 330 aaPredicted RBP16.67■□□□□ 0.26
UPF3A-203ENST00000474056 STT3AP46977 705 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 ALDH6A1Q02252 535 aaKnown RBP16.67■□□□□ 0.26
UPF3A-203ENST00000474056 IFT88Q13099 833 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 UNC50Q53HI1 259 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 C1QL3Q5VWW1 255 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 CYP20A1Q6UW02 462 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 HSDL2Q6YN16 418 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 DGAT2L6Q6ZPD8 337 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 FJX1Q86VR8 437 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 CYP4Z2PQ8N1L4 340 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 TMEM156Q8N614 296 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 CPSF7Q8N684 471 aaKnown RBP16.67■□□□□ 0.26
UPF3A-203ENST00000474056 FAM98AQ8NCA5 519 aaKnown RBP16.67■□□□□ 0.26
UPF3A-203ENST00000474056 TRPC4APQ8TEL6 797 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 ZNF721Q8TF20 911 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 UCN3Q969E3 161 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 DGAT2Q96PD7 388 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 TMEM237Q96Q45 408 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 FARSBQ9NSD9 589 aaKnown RBP16.67■□□□□ 0.26
UPF3A-203ENST00000474056 ZNF407Q9C0G0 2248 aa16.67■□□□□ 0.26
UPF3A-203ENST00000474056 A0A1W2PR48 441 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 GLOD5A6NK44 160 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 FOXO6A8MYZ6 492 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 WWP2O00308 870 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 OR2J2O76002 312 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 OR4F21O95013 312 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 AIFM1O95831 613 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 OTCP00480 354 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 NR2F6P10588 404 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 PYGBP11216 843 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 HSD17B3P37058 310 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 SSR4P51571 173 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 HK2P52789 917 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 HERVK_113P63132 956 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 CLCQ05315 142 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 SGO1Q5FBB7 561 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 ZNF678Q5SXM1 525 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 EIF1ADQ8N9N8 165 aaKnown RBP16.66■□□□□ 0.26
UPF3A-203ENST00000474056 ACMSDQ8TDX5 336 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 DOK4Q8TEW6 326 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 UBLCP1Q8WVY7 318 aaPredicted RBP16.66■□□□□ 0.26
UPF3A-203ENST00000474056 TANKQ92844 425 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 TMEM125Q96AQ2 219 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 PPWD1Q96BP3 646 aaKnown RBP16.66■□□□□ 0.26
UPF3A-203ENST00000474056 ERVK-6Q9BXR3 956 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 MRPL1Q9BYD6 325 aaKnown RBP16.66■□□□□ 0.26
UPF3A-203ENST00000474056 ELOVL6Q9H5J4 265 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 MYOTQ9UBF9 498 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 TRPS1Q9UHF7 1281 aa16.66■□□□□ 0.26
UPF3A-203ENST00000474056 YARS2Q9Y2Z4 477 aaKnown RBP16.66■□□□□ 0.26
UPF3A-203ENST00000474056 NAV2Q8IVL1 2488 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 NCOA6Q14686 2063 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-203ENST00000474056 NINQ8N4C6 2090 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 A0A1W2PPM1 405 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 NPIPA5E9PKD4 350 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 SUPT7LO94864 414 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 CLDN1O95832 211 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 PDYNP01213 254 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 COX7A2P14406 83 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 ALOX15P16050 662 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-203ENST00000474056 TNFRSF8P28908 595 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 MEOX1P50221 254 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 RNF4P78317 190 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 PLIN5Q00G26 463 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 C10orf62Q5T681 223 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-203ENST00000474056 MDGA2Q7Z553 956 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 LCA5Q86VQ0 697 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 SELENOMQ8WWX9 145 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 GPR137Q96N19 417 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 RASL10BQ96S79 203 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 TEX10Q9NXF1 929 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-203ENST00000474056 NPIPA1Q9UND3 350 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 KLF13Q9Y2Y9 288 aaPredicted RBP16.65■□□□□ 0.26
UPF3A-203ENST00000474056 EXPH5Q8NEV8 1989 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 CACNA1DQ01668 2161 aa16.65■□□□□ 0.26
UPF3A-203ENST00000474056 ARHGAP10A1A4S6 786 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 A8MVJ9 347 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 HRKO00198 91 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 ZNF354AO60765 605 aaPredicted RBP16.64■□□□□ 0.25
UPF3A-203ENST00000474056 OR6B1O95007 311 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 KLK1P06870 262 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 GSTA1P08263 222 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 ATP5F1P24539 256 aaPredicted RBP16.64■□□□□ 0.25
UPF3A-203ENST00000474056 SOX3P41225 446 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 SLCO1A2P46721 670 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 BIKQ13323 160 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 RNFT1Q5M7Z0 435 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 TCHHL1Q5QJ38 904 aaPredicted RBP16.64■□□□□ 0.25
UPF3A-203ENST00000474056 SIAH3Q8IW03 269 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 SULF2Q8IWU5 870 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 C9orf40Q8IXQ3 194 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 ST13P4Q8IZP2 240 aaPredicted RBP16.64■□□□□ 0.25
UPF3A-203ENST00000474056 METTL4Q8N3J2 472 aa16.64■□□□□ 0.25
UPF3A-203ENST00000474056 C7orf57Q8NEG2 295 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms