RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 HIVEP3Q5T1R4 2406 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 UNC79Q9P2D8 2635 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 H3BQF6 201 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 FOXE1O00358 373 aaPredicted RBP8.59□□□□□ -1.03
SMC4-213ENST00000472282 MANBAO00462 879 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 CRCPO75575 148 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 KRT6AP02538 564 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 KRT6BP04259 564 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 SERPINE1P05121 402 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 CHRNGP07510 517 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 CD63P08962 238 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 NEFHP12036 1026 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 BGNP21810 368 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 CERS1P27544 350 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 ARRB2P32121 409 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 KRT6CP48668 564 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 RAP1GDS1P52306 607 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 SLC18A1P54219 525 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 BTN3A2P78410 334 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 KLC1Q07866 573 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 TGM3Q08188 693 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 AIMP2Q13155 320 aaKnown RBP8.59□□□□□ -1.03
SMC4-213ENST00000472282 TUBB8Q3ZCM7 444 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 ARL13AQ5H913 290 aaPredicted RBP8.59□□□□□ -1.03
SMC4-213ENST00000472282 DEPDC1Q5TB30 811 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 CES4AQ5XG92 561 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 CLEC6AQ6EIG7 209 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 NIPAL1Q6NVV3 410 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 IGFL3Q6UXB1 125 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 ZNF793Q6ZN11 406 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 Q6ZS92 163 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 HPS6Q86YV9 775 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 OR5T3Q8NGG3 340 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 OR6Y1Q8NGX8 325 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 QRFPRQ96P65 431 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 KCNC2Q96PR1 638 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 CRB3Q9BUF7 120 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 SORBS1Q9BX66 1292 aaKnown RBP8.59□□□□□ -1.03
SMC4-213ENST00000472282 RBCK1Q9BYM8 510 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 KRTAP4-7Q9BYR0 210 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 COPS7BQ9H9Q2 264 aaPredicted RBP8.59□□□□□ -1.03
SMC4-213ENST00000472282 FRRS1LQ9P0K9 344 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 ZNF282Q9UDV7 671 aaPredicted RBP8.59□□□□□ -1.03
SMC4-213ENST00000472282 PPT2Q9UMR5 302 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 G3BP2Q9UN86 482 aaKnown RBP8.59□□□□□ -1.03
SMC4-213ENST00000472282 SLC12A4Q9UP95 1085 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 B3GNT3Q9Y2A9 372 aa8.59□□□□□ -1.03
SMC4-213ENST00000472282 FLNCQ14315 2725 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 IGLV3-12A0A075B6K2 115 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 A0A088AWK7 358 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 TMEM233B4DJY2 109 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 PLPP1O14494 284 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 AZIN1O14977 448 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 CHST10O43529 356 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 ITM2AO43736 263 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 B3GALT2O43825 422 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 DNAJB6O75190 326 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 ULK1O75385 1050 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 JRKO75564 520 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 LYPLA1O75608 230 aaPredicted RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 AGFG2O95081 481 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 CBX6O95503 412 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 HSPA4LO95757 839 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 CELA2AP08217 269 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 ZGLP1P0C6A0 271 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 GP1BBP13224 206 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 CHN1P15882 459 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 ZNF10P21506 573 aaPredicted RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 PTX3P26022 381 aaPredicted RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 SERPINB3P29508 390 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 SERPINB5P36952 375 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 SSR2P43308 183 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 XCR1P46094 333 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 MTTPP55157 894 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 OCA2Q04671 838 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 GALNT1Q10472 559 aaPredicted RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 CUL3Q13618 768 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 AP5B1Q2VPB7 878 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 TMEM35AQ53FP2 167 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 C10orf62Q5T681 223 aaPredicted RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 FHL5Q5TD97 284 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 MFSD4BQ5TF39 518 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 FAAH2Q6GMR7 532 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 SCIMPQ6UWF3 145 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 UBE3DQ7Z6J8 389 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 ZC3H7AQ8IWR0 971 aaKnown RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 CA13Q8N1Q1 262 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 SRFBP1Q8NEF9 429 aaKnown RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 OR51Q1Q8NH59 317 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 AGR3Q8TD06 166 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 RGMAQ96B86 450 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 MIEF2Q96C03 454 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 PEX11GQ96HA9 241 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 THOC3Q96J01 351 aaKnown RBP8.58□□□□□ -1.04
SMC4-213ENST00000472282 SERPINI1Q99574 410 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 CENPKQ9BS16 269 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 TBCDQ9BTW9 1192 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 BRF2Q9HAW0 419 aa8.58□□□□□ -1.04
SMC4-213ENST00000472282 EML4Q9HC35 981 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms