RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RAB3IPQ96QF0 476 aaPredicted RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ERGIC2Q96RQ1 377 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 RAB40CQ96S21 281 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 LCE3DQ9BYE3 92 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 LSG1Q9H089 658 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 MRPL17Q9NRX2 175 aaKnown RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 GPR173Q9NS66 373 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 ABCC13Q9NSE7 274 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 RCOR3Q9P2K3 495 aaPredicted RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 NFKBIL1Q9UBC1 381 aaPredicted RBP0.98□□□□□ -2.25
UBXN4-207ENST00000471246 GPR132Q9UNW8 380 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 RNF24Q9Y225 148 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 TTLL3Q9Y4R7 772 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 MYO10Q9HD67 2058 aa0.98□□□□□ -2.25
UBXN4-207ENST00000471246 TRAV34A0A0B4J273 112 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 IGHV3-35A0A0C4DH35 117 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 WI2-2373I1.2A0A1W2PRP0 233 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 GTPBP10A4D1E9 387 aaKnown RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 EPOPA6NHQ4 379 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 YDJCA8MPS7 323 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 RNF212BA8MTL3 300 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 CCSO14618 274 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ST8SIA3O43173 380 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 FIBPO43427 364 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 KIAA0513O60268 411 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 PLOD3O60568 738 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ANXA9O76027 345 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 OR6A2O95222 327 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 SIX3O95343 332 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 PDGFBP01127 241 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 RLN1P04808 185 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ZFYP08048 801 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 TSPY3P0CV98 308 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 TSPY8P0CW00 308 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 HSD17B1P14061 328 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 EZRP15311 586 aaKnown RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 GLRA1P23415 457 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 CALML3P27482 149 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 PPP2R1BP30154 601 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 CCND3P30281 292 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 OR1D2P34982 312 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 IER3P46695 156 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 NDST1P52848 882 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 SLC25A1P53007 311 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ERVPABLB-1P60509 514 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 AKAP17AQ02040 695 aaKnown RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 NUCB1Q02818 461 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 MFGE8Q08431 387 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 SLC10A1Q14973 349 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 TGIF1Q15583 401 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ACKR1Q16570 336 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 PPP1R3AQ16821 1122 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 TWISTNBQ3B726 338 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 UNC50Q53HI1 259 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ODF2Q5BJF6 829 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 WSCD1Q658N2 575 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 CAPN13Q6MZZ7 669 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF544Q6NX49 715 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 CASC4Q6P4E1 433 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ALKBH5Q6P6C2 394 aaKnown RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF530Q6P9A1 599 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 SIGLEC15Q6ZMC9 328 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 GCNT7Q6ZNI0 430 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 Q6ZRG5 221 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 WDR49Q8IV35 697 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 FBXO16Q8IX29 292 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 C4orf19Q8IY42 314 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 THNSL1Q8IYQ7 743 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF444Q8N0Y2 327 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ARL14Q8N4G2 192 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ICA1LQ8NDH6 482 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 CHDHQ8NE62 594 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 LINC01006Q8NI28 216 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 SETD6Q8TBK2 473 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF564Q8TBZ8 553 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 U2AF1L4Q8WU68 220 aaKnown RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 CKAP2Q8WWK9 683 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 DNASE1L2Q92874 299 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 FAF2Q96CS3 445 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 SGF29Q96ES7 293 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 PCED1BQ96HM7 432 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 RASL10BQ96S79 203 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 SDHCQ99643 169 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 TTYH2Q9BSA4 534 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 LRRC2Q9BYS8 371 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 DPEP3Q9H4B8 488 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 IKZF5Q9H5V7 419 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 PLEK2Q9NYT0 353 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 ADAM22Q9P0K1 906 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 EIF3KQ9UBQ5 218 aaKnown RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 MLXQ9UH92 298 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 MOKQ9UQ07 419 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 EXOC6BQ9Y2D4 811 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 NTNG1Q9Y2I2 539 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 OR1A2Q9Y585 309 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 POMT1Q9Y6A1 747 aa0.97□□□□□ -2.25
UBXN4-207ENST00000471246 RAI1Q7Z5J4 1906 aaPredicted RBP0.97□□□□□ -2.25
UBXN4-207ENST00000471246 IGHV3OR16-12A0A075B7B8 117 aa0.96□□□□□ -2.26
UBXN4-207ENST00000471246 ATP6AP2A0A1C7CYW4 349 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms