RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TCTN2Q96GX1 697 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 CENPNQ96H22 339 aaPredicted RBP17.13■□□□□ 0.33
SMC4-211ENST00000469858 CSF3RQ99062 836 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 COQ10BQ9H8M1 238 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 GIMAP4Q9NUV9 329 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 DAPP1Q9UN19 280 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 SAMD4AQ9UPU9 718 aaKnown RBP17.13■□□□□ 0.33
SMC4-211ENST00000469858 NAALAD2Q9Y3Q0 740 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 ADAMTS9Q9P2N4 1935 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 ARID1BQ8NFD5 2236 aaPredicted RBP17.13■□□□□ 0.33
SMC4-211ENST00000469858 TMEM221A6NGB7 291 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 TLCD2A6NGC4 264 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 MYO1GB0I1T2 1018 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 M0R296 226 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 NUDT21O43809 227 aaKnown RBP17.13■□□□□ 0.33
SMC4-211ENST00000469858 LDLRP01130 860 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 CCT8P50990 548 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 DUSP2Q05923 314 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 TP53BP2Q13625 1128 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 ATP6AP1Q15904 470 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 CMPK2Q5EBM0 449 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 GATAD2AQ86YP4 633 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 CCDC116Q8IYX3 515 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 EID3Q8N140 333 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 DNAJC22Q8N4W6 341 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 PYURFQ96I23 114 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 SOHLH2Q9NX45 425 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 LRCH1Q9Y2L9 728 aa17.13■□□□□ 0.33
SMC4-211ENST00000469858 B4GALT2O60909 372 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 CSNK2A2P19784 350 aaPredicted RBP17.12■□□□□ 0.33
SMC4-211ENST00000469858 MLLT3P42568 568 aaPredicted RBP17.12■□□□□ 0.33
SMC4-211ENST00000469858 CCT3P49368 545 aaKnown RBP17.12■□□□□ 0.33
SMC4-211ENST00000469858 NRF1Q16656 503 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 CEP68Q76N32 757 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 C6orf120Q7Z4R8 191 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 PSMA8Q8TAA3 256 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 SUN3Q8TAQ9 357 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 ZDHHC12Q96GR4 267 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 YY1AP1Q9H869 796 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 PSME2Q9UL46 239 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 ZNF780BQ9Y6R6 833 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 SPTBP11277 2137 aa17.12■□□□□ 0.33
SMC4-211ENST00000469858 IGHV5-51A0A0C4DH38 117 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 GALR3O60755 368 aaPredicted RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 GLB1P16278 677 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 ZNF26P17031 533 aaPredicted RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 EPHA8P29322 1005 aaPredicted RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 DSTNP60981 165 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 SCARB2Q14108 478 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 AMZ1Q400G9 498 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 TNFAIP8L2Q6P589 184 aaPredicted RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 CEACAM20Q6UY09 585 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 EPHX4Q8IUS5 362 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 OR5T3Q8NGG3 340 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 NFKBIDQ8NI38 313 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 VPS50Q96JG6 964 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 MAGED4Q96JG8 741 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 TMEM38AQ9H6F2 299 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 MAGIXQ9H6Y5 334 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 MS4A12Q9NXJ0 267 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 RPS6KA6Q9UK32 745 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 SLC22A7Q9Y694 548 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 ASXL3Q9C0F0 2248 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 IGHV1OR21-1A0A087WYE8 117 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 CLOCKO15516 846 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 DEAF1O75398 565 aaPredicted RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 CFIP05156 583 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 TLX1P31314 330 aaPredicted RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 SIM1P81133 766 aaPredicted RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 RBBP4Q09028 425 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 OR52E8Q6IFG1 317 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 ZBTB49Q6ZSB9 765 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 ZC3H7AQ8IWR0 971 aaKnown RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 HORMAD2Q8N7B1 307 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 Q8N9G6 341 aaPredicted RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 POP5Q969H6 163 aaKnown RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 C10orf90Q96M02 699 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 SLC29A1Q99808 456 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 RAB33BQ9H082 229 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 LYRM4Q9HD34 91 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 SEMA3GQ9NS98 782 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 ZCCHC3Q9NUD5 404 aaKnown RBP17.11■□□□□ 0.33
SMC4-211ENST00000469858 EPHA6Q9UF33 1036 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 OAZ3Q9UMX2 235 aa17.11■□□□□ 0.33
SMC4-211ENST00000469858 SGK494L7N484 410 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 PDLIM1O00151 329 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 SOCS2O14508 198 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 SRPX2O60687 465 aaPredicted RBP17.1■□□□□ 0.33
SMC4-211ENST00000469858 MPIP34949 423 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 CDK6Q00534 326 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 SHISA5Q8N114 240 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 DTWD2Q8NBA8 298 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 ZNF681Q96N22 645 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 BDH2Q9BUT1 245 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 ANKHQ9HCJ1 492 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 IRAK4Q9NWZ3 460 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 ZSCAN32Q9NX65 697 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 CNOT11Q9UKZ1 510 aaKnown RBP17.1■□□□□ 0.33
SMC4-211ENST00000469858 SPACA6W5XKT8 324 aa17.1■□□□□ 0.33
SMC4-211ENST00000469858 UNC13CQ8NB66 2214 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms