RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 C19orf25Q9UFG5 118 aaPredicted RBP14.29□□□□□ -0.12
SNIP1-202ENST00000468040 IL17BQ9UHF5 180 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 UTS2RQ9UKP6 389 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 IGKV3D-11A0A0A0MRZ8 115 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 SCAMP2O15127 329 aaKnown RBP14.28□□□□□ -0.12
SNIP1-202ENST00000468040 PGRMC2O15173 223 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 AKAP10O43572 662 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 FGF17O60258 216 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 LDB3O75112 727 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 LRATO95237 230 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 GPR75O95800 540 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 FAM107AO95990 144 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 MAOAP21397 527 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 CLNS1AP54105 237 aaKnown RBP14.28□□□□□ -0.12
SNIP1-202ENST00000468040 FOXL2P58012 376 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 SF3A3Q12874 501 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNIP1-202ENST00000468040 PDE7AQ13946 482 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 PDCD4Q53EL6 469 aaKnown RBP14.28□□□□□ -0.12
SNIP1-202ENST00000468040 RIPOR1Q6ZS17 1223 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 RAB43Q86YS6 212 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 TICAM1Q8IUC6 712 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 MMP21Q8N119 569 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 MIER2Q8N344 545 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 OR4K14Q8NGD5 310 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 ZCCHC14Q8WYQ9 949 aaKnown RBP14.28□□□□□ -0.12
SNIP1-202ENST00000468040 GFM2Q969S9 779 aaKnown RBP14.28□□□□□ -0.12
SNIP1-202ENST00000468040 ANKRD9Q96BM1 317 aaPredicted RBP14.28□□□□□ -0.12
SNIP1-202ENST00000468040 PPCDCQ96CD2 204 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 KLHL29Q96CT2 875 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 CATSPER2Q96P56 530 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 ZBTB18Q99592 522 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 GIMAP4Q9NUV9 329 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 ATAD3AQ9NVI7 634 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 TAS2R7Q9NYW3 318 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 CES1P1Q9UKY3 287 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 EXO1Q9UQ84 846 aaKnown RBP14.28□□□□□ -0.12
SNIP1-202ENST00000468040 ZNF780BQ9Y6R6 833 aa14.28□□□□□ -0.12
SNIP1-202ENST00000468040 TCRBV16S1A1N1A0A5B0 115 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 OR2W5A6NFC9 320 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 ANKRD28O15084 1053 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 TBX19O60806 448 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 COX7A2P14406 83 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 CSNK2A2P19784 350 aaPredicted RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 NCF2P19878 526 aaPredicted RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 OTX2P32243 289 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 MRPL19P49406 292 aaKnown RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 ATP4BP51164 291 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 IGLV3-21P80748 117 aaPredicted RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 SQLEQ14534 574 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 UGT8Q16880 541 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 CRTC2Q53ET0 693 aaPredicted RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 FAM69BQ5VUD6 431 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 BROXQ5VW32 411 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 TMEM205Q6UW68 189 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 LRRC69Q6ZNQ3 347 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 PROSER1Q86XN7 944 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 SPACA3Q8IXA5 215 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 RIMKLAQ8IXN7 391 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 NATD1Q8N6N6 113 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 GLB1L3Q8NCI6 653 aaPredicted RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 UCN3Q969E3 161 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 EXOSC8Q96B26 276 aaKnown RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 MARK4Q96L34 752 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 IP6K3Q96PC2 410 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 CCT8L2Q96SF2 557 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 PELOQ9BRX2 385 aaKnown RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 RABEP2Q9H5N1 569 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 SLC35C2Q9NQQ7 365 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 NECTIN3Q9NQS3 549 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 TMEM45AQ9NWC5 275 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 ZIM2Q9NZV7 527 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 SH3BP4Q9P0V3 963 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 ATP6V1HQ9UI12 483 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 G3BP2Q9UN86 482 aaKnown RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 ENTPD4Q9Y227 616 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
SNIP1-202ENST00000468040 MRPS18BQ9Y676 258 aaKnown RBP14.27□□□□□ -0.13
SNIP1-202ENST00000468040 LOC102723996A0A087X1L8 192 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 ZNF891A8MT65 544 aaPredicted RBP14.26□□□□□ -0.13
SNIP1-202ENST00000468040 ERAL1O75616 437 aaKnown RBP14.26□□□□□ -0.13
SNIP1-202ENST00000468040 SLC22A3O75751 556 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 EFNA3P52797 238 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 PLIN5Q00G26 463 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 IL10RAQ13651 578 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 DPY19L1Q2PZI1 675 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 CPTPQ5TA50 214 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 GKAP1Q5VSY0 366 aaPredicted RBP14.26□□□□□ -0.13
SNIP1-202ENST00000468040 FAAH2Q6GMR7 532 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 PPP1R32Q7Z5V6 425 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 CAMKMTQ7Z624 323 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 ANKRD37Q7Z713 158 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 PIGWQ7Z7B1 504 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 OR4N5Q8IXE1 308 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 ST13P4Q8IZP2 240 aaPredicted RBP14.26□□□□□ -0.13
SNIP1-202ENST00000468040 KRTCAP2Q8N6L1 136 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 ZSCAN1Q8NBB4 408 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 TSLPQ969D9 159 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 TESCQ96BS2 214 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 DCBLD2Q96PD2 775 aa14.26□□□□□ -0.13
SNIP1-202ENST00000468040 ALOXE3Q9BYJ1 711 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms