RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 LYPD8Q6UX82 237 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 PIWIL4Q7Z3Z4 852 aaKnown RBP9.31□□□□□ -0.92
HDAC3-203ENST00000467533 STRA8Q7Z7C7 330 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 ARIH2OSQ8N7S6 290 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 TRPV3Q8NET8 790 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 ABHD11Q8NFV4 315 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 OR4K1Q8NGD4 311 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 OR8K1Q8NGG5 319 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 NUBPLQ8TB37 319 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 ATL1Q8WXF7 558 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 AKAP1Q92667 903 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC3-203ENST00000467533 ZMYND19Q96E35 227 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-203ENST00000467533 HS6ST2Q96MM7 605 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 CSF3RQ99062 836 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 KRT12Q99456 494 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 SGPP1Q9BX95 441 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 ALOXE3Q9BYJ1 711 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 OPN3Q9H1Y3 402 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-203ENST00000467533 UBQLN3Q9H347 655 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 EIF2B3Q9NR50 452 aaKnown RBP9.31□□□□□ -0.92
HDAC3-203ENST00000467533 EFR3BQ9Y2G0 817 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 SVEP1Q4LDE5 3571 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 CTAGE15A4D2H0 777 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 OVOL3O00110 214 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 TJP3O95049 919 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 VAPBO95292 243 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 ACTL6AO96019 429 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 IGHV4-39P01824 125 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 PTMAP06454 111 aaKnown RBP9.3□□□□□ -0.92
HDAC3-203ENST00000467533 FBXO45P0C2W1 286 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 SMIM10L1P0DMW3 83 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 NPPBP16860 134 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 NMBRP28336 390 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 SERPINB3P29508 390 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 RPL22P35268 128 aaKnown RBP9.3□□□□□ -0.92
HDAC3-203ENST00000467533 CRADDP78560 199 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 PCID2Q5JVF3 399 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 VWA1Q6PCB0 445 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 ZNF474Q6S9Z5 364 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-203ENST00000467533 SH2D5Q6ZV89 423 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 P4HA3Q7Z4N8 544 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 YRDCQ86U90 279 aaKnown RBP9.3□□□□□ -0.92
HDAC3-203ENST00000467533 CTAGE6Q86UF2 777 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 C9orf40Q8IXQ3 194 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 CPNE9Q8IYJ1 553 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 SLC15A4Q8N697 577 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 ANKRD53Q8N9V6 530 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 CAVIN3Q969G5 261 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 GAL3ST3Q96A11 431 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 PYCR2Q96C36 320 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 PGM2Q96G03 612 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 SMIM10Q96HG1 83 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 RILPQ96NA2 401 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 GNRHR2Q96P88 292 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 GAL3ST4Q96RP7 486 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 SLC39A3Q9BRY0 314 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 RHNO1Q9BSD3 238 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 NPLQ9BXD5 320 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-203ENST00000467533 C12orf65Q9H3J6 166 aaKnown RBP9.3□□□□□ -0.92
HDAC3-203ENST00000467533 TREX1Q9NSU2 369 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 ELOVL5Q9NYP7 299 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 CLCF1Q9UBD9 225 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 VTI1BQ9UEU0 232 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 INTUQ9ULD6 942 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 TENM1Q9UKZ4 2725 aa9.3□□□□□ -0.92
HDAC3-203ENST00000467533 IGHV4-30-2A0A087WSY4 118 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 A0A088AWK7 358 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 A0A0G2JK05 382 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 LRRC14BA6NHZ5 514 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 B3GALT2O43825 422 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 LMX1BO60663 402 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ETHE1O95571 254 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 CPN1P15169 458 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 EGR1P18146 543 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 PAMP19021 973 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ZNF10P21506 573 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-203ENST00000467533 CHMP24386 653 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 PTPN7P35236 360 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 SESN2P58004 480 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-203ENST00000467533 STXBP1P61764 594 aaKnown RBP9.29□□□□□ -0.92
HDAC3-203ENST00000467533 SIRPAP78324 504 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 VLDLRP98155 873 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 REEP5Q00765 189 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 CSHL1Q14406 222 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 TCEAL1Q15170 157 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 RBBP5Q15291 538 aaKnown RBP9.29□□□□□ -0.92
HDAC3-203ENST00000467533 KBTBD12Q3ZCT8 623 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 BICRALQ6AI39 1079 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ENPP6Q6UWR7 440 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 CYHR1Q6ZMK1 362 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 DNM1P46Q6ZS02 220 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.29□□□□□ -0.92
HDAC3-203ENST00000467533 MILR1Q7Z6M3 343 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ADGRE4PQ86SQ3 457 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 KIAA1328Q86T90 577 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 GPATCH11Q8N954 259 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 FAM83FQ8NEG4 500 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-203ENST00000467533 SGMS2Q8NHU3 365 aa9.29□□□□□ -0.92
HDAC3-203ENST00000467533 ZNF721Q8TF20 911 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms