RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 RAD21L1Q9H4I0 556 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 NEUROD4Q9HD90 331 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 EHD3Q9NZN3 535 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 PCDHGA8Q9Y5G5 932 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 SCN2AQ99250 2005 aa17.3■□□□□ 0.36
COL9A3-205ENST00000466192 KIR2DS5A0A0G2JLQ3 304 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 A0A0G2JNG1 304 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 LOC100130705A0A1B0GUX0 176 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 A0A1B0GVG6 124 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 KIR2DS3K7RE56 304 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 B4GALT2O60909 372 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 TNFRSF1BP20333 461 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 IGFBP5P24593 272 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 STXBP1P61764 594 aaKnown RBP17.29■□□□□ 0.36
COL9A3-205ENST00000466192 RPS26P62854 115 aaKnown RBP17.29■□□□□ 0.36
COL9A3-205ENST00000466192 CDK6Q00534 326 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 IL1RL1Q01638 556 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 KIR2DS5Q14953 304 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 IQCCQ4KMZ1 466 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 SAXO2Q658L1 398 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 PIWIL3Q7Z3Z3 882 aaKnown RBP17.29■□□□□ 0.36
COL9A3-205ENST00000466192 ASPGQ86U10 573 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 SRFBP1Q8NEF9 429 aaKnown RBP17.29■□□□□ 0.36
COL9A3-205ENST00000466192 NEURL3Q96EH8 262 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 FAIM2Q9BWQ8 316 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 KLHL25Q9H0H3 589 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 ACSS1Q9NUB1 689 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-205ENST00000466192 PDP1Q9P0J1 537 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-205ENST00000466192 FBXL21Q9UKT6 434 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 FBXW2Q9UKT8 454 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 LAMA1P25391 3075 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 NINQ8N4C6 2090 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 OR5K4A6NMS3 321 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 PGRMC2O15173 223 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 WNT1P04628 370 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 DAPP51397 102 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 RAD23AP54725 363 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 ITGA1P56199 1179 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 FIGLAQ6QHK4 219 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 TAMM41Q96BW9 452 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 OR2A5Q96R48 311 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 LRRC61Q9BV99 259 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 RUBCNLQ9H714 662 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 REEP1Q9H902 201 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 SLC35C2Q9NQQ7 365 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 EVA1BQ9NVM1 165 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 WNT16Q9UBV4 365 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 CEPT1Q9Y6K0 416 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 EML5Q05BV3 1969 aa17.29■□□□□ 0.36
COL9A3-205ENST00000466192 TRIM64CA6NLI5 447 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 M0QX08 132 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 FOSL2P15408 326 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 JUNDP17535 347 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 FPR1P21462 350 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 TSFMP43897 325 aaKnown RBP17.28■□□□□ 0.36
COL9A3-205ENST00000466192 LSSP48449 732 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 CYP27C1Q4G0S4 372 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 C18orf63Q68DL7 685 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 ZNF761Q86XN6 746 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-205ENST00000466192 SIX5Q8N196 739 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 FAM81AQ8TBF8 368 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 TM4SF19Q96DZ7 209 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 GLIPR2Q9H4G4 154 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 VCX3AQ9NNX9 186 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 COMMD3-BMI1R4GMX3 469 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 A0A0J9YVX5 310 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 METTL12A8MUP2 240 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 P2RX6O15547 441 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 PRAMEF10O60809 474 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 NDUFS2O75306 463 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 AIFM1O95831 613 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 ARAFP10398 606 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 IL7RP16871 459 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 CDH2P19022 906 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-205ENST00000466192 EEF1B2P24534 225 aaKnown RBP17.28■□□□□ 0.36
COL9A3-205ENST00000466192 OR1E2P47887 323 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 BLKP51451 505 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 DSTNP60981 165 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 BTN3A2P78410 334 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 MLC1Q15049 377 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 ZNF630Q2M218 657 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-205ENST00000466192 RFX4Q33E94 735 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 BORAQ6PGQ7 559 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 CEACAM20Q6UY09 585 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 HORMAD2Q8N7B1 307 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 FAM46DQ8NEK8 389 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 PSMA8Q8TAA3 256 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 NT5CQ8TCD5 201 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 AMDHD1Q96NU7 426 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 YTHDF1Q9BYJ9 559 aaKnown RBP17.28■□□□□ 0.36
COL9A3-205ENST00000466192 GABARAPL1Q9H0R8 117 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 ADNPQ9H2P0 1102 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 HRASLS2Q9NWW9 162 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 THUMPD1Q9NXG2 353 aaKnown RBP17.28■□□□□ 0.36
COL9A3-205ENST00000466192 PILRAQ9UKJ1 303 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 PADI2Q9Y2J8 665 aa17.28■□□□□ 0.36
COL9A3-205ENST00000466192 ZNF888P0CJ79 500 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-205ENST00000466192 PVRP15151 417 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 CD27P26842 260 aa17.27■□□□□ 0.36
COL9A3-205ENST00000466192 MAOBP27338 520 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms