RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TMEM129A0AVI4 362 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 LINC00862A6NCI5 91 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 NPIPB15A6NHN6 443 aaPredicted RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 HEPACAM2A8MVW5 462 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 LEUTXA8MZ59 168 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 H7C4K7 107 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 FFAR1O14842 300 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 SLC30A4O14863 429 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 LYRM1O43325 122 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 TBL1XO60907 577 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 FGF9P31371 208 aaPredicted RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 CSKP41240 450 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 MAN2A2P49641 1150 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 XKP51811 444 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 WNT4P56705 351 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 BTG1P62324 171 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 RIPPLY1Q0D2K3 151 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 SF1Q15637 639 aaKnown RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 WSCD2Q2TBF2 565 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 ATP13A5Q4VNC0 1218 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 RETSATQ6NUM9 610 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 KIAA1211LQ6NV74 962 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 CRTC1Q6UUV9 634 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 RSPO2Q6UXX9 243 aaPredicted RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 UNC5DQ6UXZ4 953 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 CEACAM20Q6UY09 585 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 TPRG1Q6ZUI0 275 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 USP30Q70CQ3 517 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 SLC24A5Q71RS6 500 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 ARMCX6Q7L4S7 300 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 TSPAN33Q86UF1 283 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 LAPTM4BQ86VI4 370 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 BPHLQ86WA6 291 aaPredicted RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 TMC8Q8IU68 726 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP48-206ENST00000464577 SLC38A6Q8IZM9 456 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 ATP6V1C2Q8NEY4 427 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 HUS1BQ8NHY5 278 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 BHMTQ93088 406 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 MTERF3Q96E29 417 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 ZBED6CLQ96FA7 236 aaPredicted RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 TEFMQ96QE5 360 aaKnown RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 KCNJ15Q99712 375 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 TMEM43Q9BTV4 400 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 WRAP53Q9BUR4 548 aaKnown RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 KATNB1Q9BVA0 655 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 KLF16Q9BXK1 252 aaPredicted RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 PRRG3Q9BZD7 231 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 TRIM45Q9H8W5 580 aaPredicted RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 MYNNQ9NPC7 610 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 MRPS18AQ9NVS2 196 aaKnown RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 EIF3KQ9UBQ5 218 aaKnown RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 NUP50Q9UKX7 468 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 GSTK1Q9Y2Q3 226 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 SF3B6Q9Y3B4 125 aaKnown RBP6.95□□□□□ -1.3
USP48-206ENST00000464577 AUP1Q9Y679 476 aa6.95□□□□□ -1.3
USP48-206ENST00000464577 FAM240BA0A1B0GVZ2 78 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 GNG14A0A1W2PPG7 69 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PRR23AA6NEV1 266 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 K7ERQ8 282 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 AKR7A2O43488 359 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 IGSF6O95976 241 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 FURINP09958 794 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PSKH1P11801 424 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ARSBP15848 533 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 HK1P19367 917 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CFL1P23528 166 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 ELAVL4P26378 380 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 APEX1P27695 318 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 SERPINA4P29622 427 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CCND3P30281 292 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 GABRA5P31644 462 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CHI3L1P36222 383 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 LIM2P55344 173 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 SMIM11AP58511 58 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ABATP80404 500 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 MRPL28Q13084 256 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 PUM1Q14671 1186 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP48-206ENST00000464577 LEXMQ3ZCV2 418 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CYP27C1Q4G0S4 372 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 KLHL22Q53GT1 634 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 ATAT1Q5SQI0 421 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 DCST1Q5T197 706 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 REEP3Q6NUK4 255 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PGBD2Q6P3X8 592 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CNIH2Q6PI25 160 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CD200R1LQ6Q8B3 271 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 PAQR6Q6TCH4 344 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 CD300LDQ6UXZ3 194 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 DNAJB7Q7Z6W7 309 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 METTL3Q86U44 580 aaKnown RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 GPR65Q8IYL9 337 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 GHDCQ8N2G8 530 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 Q8N402 240 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 C9orf62Q8N4C0 152 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 TCEANCQ8N8B7 351 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 TP53I13Q8NBR0 393 aaPredicted RBP6.94□□□□□ -1.3
USP48-206ENST00000464577 TMEM145Q8NBT3 493 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 OR7G3Q8NG95 312 aa6.94□□□□□ -1.3
USP48-206ENST00000464577 OR4K1Q8NGD4 311 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms