RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ABI3BPQ7Z7G0 1075 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 CLYBLQ8N0X4 340 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 TEX9Q8N6V9 391 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 PRSS33Q8NF86 280 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 UBTD2Q8WUN7 234 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF566Q969W8 418 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 ATP6V1E2Q96A05 226 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 FBXL8Q96CD0 374 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 FAR2Q96K12 515 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 HIST1H2AAQ96QV6 131 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 PRR25Q96S07 402 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 EBF4Q9BQW3 602 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 TMEM79Q9BSE2 394 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 TIMM29Q9BSF4 260 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 WWP1Q9H0M0 922 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 OR52A5Q9H2C5 316 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 STN1Q9H668 368 aaKnown RBP7.03□□□□□ -1.28
UBE4B-204ENST00000462658 NOL11Q9H8H0 719 aaKnown RBP7.03□□□□□ -1.28
UBE4B-204ENST00000462658 CPNE5Q9HCH3 593 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 ZBTB26Q9HCK0 441 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 MID1IP1Q9NPA3 183 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 MRPL40Q9NQ50 206 aaKnown RBP7.03□□□□□ -1.28
UBE4B-204ENST00000462658 DUSP22Q9NRW4 184 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 OPTCQ9UBM4 332 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 DNAJB11Q9UBS4 358 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 ACSL5Q9ULC5 683 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 PSMD13Q9UNM6 376 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 FIS1Q9Y3D6 152 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 ANGPTL3Q9Y5C1 460 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 NUMA1Q14980 2115 aa7.03□□□□□ -1.28
UBE4B-204ENST00000462658 FANCMQ8IYD8 2048 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 WDR87Q6ZQQ6 2873 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 FAM234BA2RU67 622 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 TRPC5OSA6NMA1 111 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 K7EPI3 171 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 IFRD1O00458 451 aaPredicted RBP7.02□□□□□ -1.29
UBE4B-204ENST00000462658 AZIN1O14977 448 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 PI15O43692 258 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 DIAPH2O60879 1101 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 CRCPO75575 148 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 NUDT3O95989 172 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 IDSP22304 550 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 ITPKBP27987 946 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 MAGEA9P43362 315 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 CLCNKAP51800 687 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 THOP1P52888 689 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 PKNOX1P55347 436 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 TIRAPP58753 221 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 SRP54P61011 504 aaKnown RBP7.02□□□□□ -1.29
UBE4B-204ENST00000462658 E2F1Q01094 437 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 SIGLEC14Q08ET2 396 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 DMPKQ09013 629 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 PDCD2Q16342 344 aaPredicted RBP7.02□□□□□ -1.29
UBE4B-204ENST00000462658 MPEG1Q2M385 716 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 CCSMST1Q4G0I0 132 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 SLC9B1Q4ZJI4 515 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.02□□□□□ -1.29
UBE4B-204ENST00000462658 TPRG1LQ5T0D9 272 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 VWA5B1Q5TIE3 1220 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 CLEC6AQ6EIG7 209 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 CLEC9AQ6UXN8 241 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 UNC5DQ6UXZ4 953 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 CCDC121Q6ZUS5 278 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 GPRIN3Q6ZVF9 776 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 RD3Q7Z3Z2 195 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 SYVN1Q86TM6 617 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 DEFB119Q8N690 84 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 METTL25Q8N6Q8 603 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 TMEM105Q8N8V8 129 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 CADM4Q8NFZ8 388 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 OR9A1PQ8NGU1 263 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 MAPK15Q8TD08 544 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 MAGEC3Q8TD91 643 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 AGAP11Q8TF27 550 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 ATL1Q8WXF7 558 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 OR1E3Q8WZA6 343 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 CCT6BQ92526 530 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 TFGQ92734 400 aaPredicted RBP7.02□□□□□ -1.29
UBE4B-204ENST00000462658 TSACCQ96A04 125 aaPredicted RBP7.02□□□□□ -1.29
UBE4B-204ENST00000462658 PPP1R36Q96LQ0 422 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 OR2M4Q96R27 311 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 ZNF382Q96SR6 550 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 PKP4Q99569 1192 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 NUF2Q9BZD4 464 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 ATG10Q9H0Y0 220 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 SLC25A32Q9H2D1 315 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 OSGEPL1Q9H4B0 414 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 SLC32A1Q9H598 525 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 FGF22Q9HCT0 170 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 ABCF3Q9NUQ8 709 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 DLGAP2Q9P1A6 1054 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 LPAR3Q9UBY5 353 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 KLQ9UEF7 1012 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 ZNF225Q9UK10 706 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 KCNK6Q9Y257 313 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 ASF1AQ9Y294 204 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 STK38LQ9Y2H1 464 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 ENTPD2Q9Y5L3 495 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 PIKFYVEQ9Y2I7 2098 aa7.02□□□□□ -1.29
UBE4B-204ENST00000462658 GOLGA8QA0A0J9YX86 632 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms