RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ETHE1O95571 254 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 TUBB4AP04350 444 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 RBP1P09455 135 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 COL6A2P12110 1019 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 GFAPP14136 432 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 ABOP16442 354 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 HTR1EP28566 365 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 GRNP28799 593 aaKnown RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 GALNSP34059 522 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 PTGS2P35354 604 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 BSGP35613 385 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 SSR2P43308 183 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 SERPINB9P50453 376 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 HK2P52789 917 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 GTF2H2Q13888 395 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 GLE1Q53GS7 698 aaKnown RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 PIGGQ5H8A4 983 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 TECRLQ5HYJ1 363 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 C10orf62Q5T681 223 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 GTF2H2CQ6P1K8 395 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 OPN5Q6U736 354 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 C16orf47Q6ZP98 133 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 RGS9BPQ6ZS82 235 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 EID3Q8N140 333 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 PLD6Q8N2A8 252 aaKnown RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF321PQ8N8H1 164 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 PSD4Q8NDX1 1056 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 NUBPLQ8TB37 319 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 FAM57AQ8TBR7 257 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 WDR20Q8TBZ3 569 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 SLC2A12Q8TD20 617 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF721Q8TF20 911 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 ASB15Q8WXK1 588 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 MRRFQ96E11 262 aaKnown RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 RBM18Q96H35 190 aaKnown RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 SENP5Q96HI0 755 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 NTMT1Q9BV86 223 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 SORBS1Q9BX66 1292 aaKnown RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 OR8D2Q9GZM6 311 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 RPF2Q9H7B2 306 aaKnown RBP8.49□□□□□ -1.05
BRCA1-207ENST00000461798 IPPKQ9H8X2 491 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 DEPPQ9NTK1 212 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 HPF1Q9NWY4 346 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 SH3BGRL2Q9UJC5 107 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 ERVK-11Q9UQG0 969 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 RNF11Q9Y3C5 154 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 ATG4BQ9Y4P1 393 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 ASB4Q9Y574 426 aa8.49□□□□□ -1.05
BRCA1-207ENST00000461798 PCNX1Q96RV3 2341 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 A0A0A6YYD5 115 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 MYOCOSA0A1B0GUC4 107 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ARHGAP10A1A4S6 786 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 LRRC14BA6NHZ5 514 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 STX16-NPEPL1H3BU86 382 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 WWP2O00308 870 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 SAP18O00422 153 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 OR7A17O14581 309 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 STX16O14662 325 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 TFECO14948 347 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 HS6ST1O60243 411 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ZNF354AO60765 605 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 SH3BGRLO75368 114 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 GLSO94925 669 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 SEMA3DO95025 777 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 SIX3O95343 332 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 CLDN9O95484 217 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 CLDN14O95500 239 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 GPR75O95800 540 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 PRF1P14222 555 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 COX7A2P14406 83 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 CNR1P21554 472 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 CNTFP26441 200 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ECHS1P30084 290 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 TLX1P31314 330 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 PTGER1P34995 402 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 PTGER4P35408 488 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 SOX3P41225 446 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 RAP1GDS1P52306 607 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 HNRNPH2P55795 449 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 RPS13P62277 151 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 PHEXP78562 749 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 HSF1Q00613 529 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 TNFRSF17Q02223 184 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 DDX39BQ13838 428 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 UAP1Q16222 522 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 CPSF6Q16630 551 aaKnown RBP eCLIP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 HYAL4Q2M3T9 481 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 UBAP2Q5T6F2 1119 aaKnown RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 NDUFAF5Q5TEU4 345 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ARHGAP11AQ6P4F7 1023 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 PAOXQ6QHF9 649 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 IL20RBQ6UXL0 311 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 RTL4Q6ZR62 310 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 GOLGA7Q7Z5G4 137 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 OR4N5Q8IXE1 308 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 ST13P4Q8IZP2 240 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-207ENST00000461798 RNF175Q8N4F7 328 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 TMEM151AQ8N4L1 468 aa8.48□□□□□ -1.05
BRCA1-207ENST00000461798 SLC15A4Q8N697 577 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms