RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 TEX10Q9NXF1 929 aaPredicted RBP21.07■□□□□ 0.96
C9orf3-209ENST00000460573 FBXL4Q9UKA2 621 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 PCDHA9Q9Y5H5 950 aa21.07■□□□□ 0.96
C9orf3-209ENST00000460573 IGHV1-45A0A0A0MS14 117 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 NSG1A0A0A6YYJ2 146 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 ARGFXA6NJG6 315 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 TRPC5OSA6NMA1 111 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 HDAC3O15379 428 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 COX6A1P12074 109 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 ICAM2P13598 275 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 DRD2P14416 443 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 OR4D2P58180 307 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 AP2B1P63010 937 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 ACTN3Q08043 901 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-209ENST00000460573 MAD2L1Q13257 205 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-209ENST00000460573 HEPACAMQ14CZ8 416 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 PCOLCEQ15113 449 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 GALNTL6Q49A17 601 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 LANCL3Q6ZV70 420 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 PARP9Q8IXQ6 854 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 CLEC1AQ8NC01 280 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 C16orf78Q8WTQ4 265 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 TUBGCP3Q96CW5 907 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 C3orf30Q96M34 536 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 TRIM4Q9C037 500 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 ING2Q9H160 280 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 ATP13A2Q9NQ11 1180 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 PSME2Q9UL46 239 aa21.06■□□□□ 0.96
C9orf3-209ENST00000460573 TAS2R50P59544 299 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 RPL38P63173 70 aaKnown RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 IGLV3-21P80748 117 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 KCNC4Q03721 635 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 EEF1A2Q05639 463 aaKnown RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 AIMP2Q13155 320 aaKnown RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 RFTN2Q52LD8 501 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 SFT2D3Q587I9 215 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 C6orf136Q5SQH8 315 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 CLNKQ7Z7G1 428 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 PTRH1Q86Y79 214 aaKnown RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 C9orf43Q8TAL5 461 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 DNAJB14Q8TBM8 379 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 ANKRD9Q96BM1 317 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 LPAR4Q99677 370 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 EBPLQ9BY08 206 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 ALOXE3Q9BYJ1 711 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 MEAF6Q9HAF1 191 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 MYNNQ9NPC7 610 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 TUBD1Q9UJT1 453 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 DLGAP4Q9Y2H0 992 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 POLR3HQ9Y535 204 aaPredicted RBP21.05■□□□□ 0.96
C9orf3-209ENST00000460573 CLDN16Q9Y5I7 305 aa21.05■□□□□ 0.96
C9orf3-209ENST00000460573 ATP6AP2A0A1C7CYW4 349 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 LDB3O75112 727 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 PEX11AO75192 247 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 ATP6AP2O75787 350 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 GPR75O95800 540 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 SOX8P57073 446 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 TERF2Q15554 542 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 SLC48A1Q6P1K1 146 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 IKBIPQ70UQ0 350 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 TMEM132CQ8N3T6 1108 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 PELOQ9BRX2 385 aaKnown RBP21.04■□□□□ 0.96
C9orf3-209ENST00000460573 NUF2Q9BZD4 464 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 CLMPQ9H6B4 373 aa21.04■□□□□ 0.96
C9orf3-209ENST00000460573 TGFBR3LH3BV60 316 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 PGRMC2O15173 223 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 FGF17O60258 216 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 KLHL41O60662 606 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 PRKRAO75569 313 aaKnown RBP21.03■□□□□ 0.96
C9orf3-209ENST00000460573 JUNP05412 331 aaKnown RBP21.03■□□□□ 0.96
C9orf3-209ENST00000460573 IL3P08700 152 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 KITP10721 976 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 PIK3R1P27986 724 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 FOLH1Q04609 750 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 EXT1Q16394 746 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 PAPD4Q6PIY7 484 aaKnown RBP21.03■□□□□ 0.96
C9orf3-209ENST00000460573 WDR75Q8IWA0 830 aaKnown RBP21.03■□□□□ 0.96
C9orf3-209ENST00000460573 OR4K14Q8NGD5 310 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.03■□□□□ 0.96
C9orf3-209ENST00000460573 IMMP1LQ96LU5 166 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 MESP1Q9BRJ9 268 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 ADAP2Q9NPF8 381 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 EHD3Q9NZN3 535 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 MARCOQ9UEW3 520 aaPredicted RBP21.03■□□□□ 0.96
C9orf3-209ENST00000460573 CES1P1Q9UKY3 287 aa21.03■□□□□ 0.96
C9orf3-209ENST00000460573 GLOD5A6NK44 160 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 IFNA16P05015 189 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 PRR35P0CG20 571 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 PRPS2P11908 318 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 PCSK2P16519 638 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 ASMTP46597 345 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 EMX2Q04743 252 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 C2orf80Q0P641 193 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 ELAVL1Q15717 326 aaKnown RBP21.02■□□□□ 0.96
C9orf3-209ENST00000460573 FAM71E1Q6IPT2 247 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 RIPOR1Q6ZS17 1223 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 KBTBD2Q8IY47 623 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 SAMD14Q8IZD0 417 aaPredicted RBP21.02■□□□□ 0.96
C9orf3-209ENST00000460573 FNDC5Q8NAU1 212 aa21.02■□□□□ 0.96
C9orf3-209ENST00000460573 RBM18Q96H35 190 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms