RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ERVK-16P61578 105 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 OR1C1Q15619 314 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 NEPROQ6NW34 567 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 Q71RC1 249 aaPredicted RBP2.8□□□□□ -1.96
RFC4-211ENST00000460408 RABEPKQ7Z6M1 372 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 C17orf64Q86WR6 236 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 WDR49Q8IV35 697 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 CCDC197Q8NCU1 140 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 MAPK1IP1LQ8NDC0 245 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 SSC4DQ8WTU2 575 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 UBTD2Q8WUN7 234 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 PRCCQ92733 491 aaPredicted RBP2.8□□□□□ -1.96
RFC4-211ENST00000460408 ATP6V0A1Q93050 837 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 GLYATL1Q969I3 302 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 SLCO4A1Q96BD0 722 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 DTD2Q96FN9 168 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 AGPAT1Q99943 283 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 TMEM245Q9H330 911 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 DPEP3Q9H4B8 488 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 DBNDD1Q9H9R9 158 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 MED17Q9NVC6 651 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 TECRQ9NZ01 308 aaKnown RBP2.8□□□□□ -1.96
RFC4-211ENST00000460408 NUDT4Q9NZJ9 180 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 HMG20BQ9P0W2 317 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 BAIAP2L1Q9UHR4 511 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 SH3GLB1Q9Y371 365 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 RNF215Q9Y6U7 377 aa2.8□□□□□ -1.96
RFC4-211ENST00000460408 SUPT6HQ7KZ85 1726 aaKnown RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 COL2A1P02458 1487 aaPredicted RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 NPATQ14207 1427 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 FAM135BQ49AJ0 1406 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 C9orf84Q5VXU9 1444 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 CNTLNQ9NXG0 1405 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 IGHV3OR16-10A0A075B7F0 116 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 TRBV5-4A0A0C4DH59 114 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 IQCMA0A1B0GVH7 501 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 ARHGEF33A8MVX0 844 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 K7EQG2 157 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 INPP4BO15327 924 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 B4GAT1O43505 415 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 PRDM1O75626 825 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 TXNDC12O95881 172 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 CALCAP01258 141 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 P4HA1P13674 534 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 FCARP24071 287 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 PKLRP30613 574 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 FCGR2BP31994 310 aaPredicted RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 FCGR2CP31995 323 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 ZFP36L2P47974 494 aaKnown RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 HSPA14Q0VDF9 509 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 CBX3Q13185 183 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 GCKRQ14397 625 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 HEPACAMQ14CZ8 416 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 ZNF146Q15072 292 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 KNOP1Q1ED39 458 aaKnown RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 WSCD2Q2TBF2 565 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 RFTN2Q52LD8 501 aaPredicted RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 TAF1BQ53T94 588 aaPredicted RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 C1orf186Q6ZWK4 172 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 PEX5LQ8IYB4 626 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 OR52B6Q8NGF0 335 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 OR6F1Q8NGZ6 308 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 OR4L1Q8NH43 312 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 OR4A16Q8NH70 328 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 LRRC15Q8TF66 581 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 ZNF689Q96CS4 500 aaPredicted RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 MRPL53Q96EL3 112 aaKnown RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 EEF2KMTQ96G04 330 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 ZNF274Q96GC6 653 aaPredicted RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 PCED1BQ96HM7 432 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 RAB40CQ96S21 281 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 FAM213AQ9BRX8 229 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 WWP1Q9H0M0 922 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 CARD9Q9H257 536 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 CXXC4Q9H2H0 198 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 THAP9Q9H5L6 903 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 FAM212BQ9NTI7 297 aaPredicted RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 ZCCHC3Q9NUD5 404 aaKnown RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 PIGVQ9NUD9 493 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 AKAP7Q9P0M2 348 aaPredicted RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 EXOC7Q9UPT5 735 aa2.79□□□□□ -1.96
RFC4-211ENST00000460408 TDRKHQ9Y2W6 561 aaKnown RBP2.79□□□□□ -1.96
RFC4-211ENST00000460408 ABCA8O94911 1581 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 FRMPD1Q5SYB0 1578 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 CDK13Q14004 1512 aaKnown RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 TCOF1Q13428 1488 aaKnown RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 RAPGEF2Q9Y4G8 1499 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 FHOD3Q2V2M9 1422 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 MYH15Q9Y2K3 1946 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 A0A1W2PPR1 153 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 SH3PXD2BA1X283 911 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 SLC9B1P1A6NJY1 282 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 ZBTB14O43829 449 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 BCAS2O75934 225 aaPredicted RBP2.78□□□□□ -1.96
RFC4-211ENST00000460408 FHP07954 510 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 TRIM49P0CI25 452 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 TRIM49CP0CI26 452 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 THEGLP0DJG4 465 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 NT5C2P49902 561 aa2.78□□□□□ -1.96
RFC4-211ENST00000460408 CNN1P51911 297 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms