RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	ATP1B2	P14415	290 aa	Predicted RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	IDH3A	P50213	366 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	PTP4A2	Q12974	167 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	VWA5B1	Q5TIE3	1220 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	LBX2	Q6XYB7	198 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	RNF111	Q6ZNA4	994 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	KCTD13	Q8WZ19	329 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	OR2M4	Q96R27	311 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	URM1	Q9BTM9	101 aa	Known RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	SEZ6L	Q9BYH1	1024 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	MYNN	Q9NPC7	610 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	GPR160	Q9UJ42	338 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	ENG	P17813	658 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	LMO2	P25791	158 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	ADH6	P28332	368 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	QPCT	Q16769	361 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	ZNF431	Q8TF32	576 aa	Predicted RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	METTL2A	Q96IZ6	378 aa	Known RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	FGFBP2	Q9BYJ0	223 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	PCDHGA5	Q9Y5G8	931 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	ARL6IP5	O75915	188 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	CD36	P16671	472 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	UGT1A4	P22310	534 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	PPP1R35	Q8TAP8	253 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	C16orf78	Q8WTQ4	265 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	SPTSSA	Q969W0	71 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	COG8	Q96MW5	612 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	TMEM109	Q9BVC6	243 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	COL14A1	Q05707	1796 aa	Known RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	KNTC1	P50748	2209 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	OTOF	Q9HC10	1997 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	MTX2	O75431	263 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	IL32	P24001	234 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	BDKRB1	P46663	353 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	EEFSEC	P57772	596 aa	Known RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	DAOA	P59103	153 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	NPRL3	Q12980	569 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	NPTX1	Q15818	432 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	TMEM214	Q6NUQ4	689 aa	Known RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	TMEM71	Q6P5X7	295 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	NCEH1	Q6PIU2	408 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	GALNT15	Q8N3T1	639 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	OR14A2	Q96R54	314 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	ZNF446	Q9NWS9	450 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	ARFGEF2	Q9Y6D5	1785 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	SMIM30	A4D0T7	59 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850		D6RAR5	112 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850		I3L521	148 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	PNMT	P11086	282 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	HOXA9	P31269	272 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	SOX2	P48431	317 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	RPS21	P63220	83 aa	Known RBP	11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	DSC3	Q14574	896 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	FAM214A	Q32MH5	1076 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	AKR1C8P	Q5T2L2	129 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	SLX4IP	Q5VYV7	408 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	CREB3L2	Q70SY1	520 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	EFCAB11	Q9BUY7	163 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	OR2S2	Q9NQN1	319 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	PRODH2	Q9UF12	536 aa		11.63	□□□□□ -0.55
ABCA2-208	ENST00000459850	FAM170B	A6NMN3	283 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	LRIT3	Q3SXY7	679 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	CBR4	Q8N4T8	237 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	ZNF781	Q8N8C0	355 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	OR56A1	Q8NGH5	318 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	EBF3	Q9H4W6	596 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	KCNK6	Q9Y257	313 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	RP1	P56715	2156 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	ZNF43	P17038	809 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	PRMT2	P55345	433 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	FXYD4	P59646	89 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	PLCXD2	Q0VAA5	305 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	LASP1	Q14847	261 aa	Known RBP	11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	BPHL	Q86WA6	291 aa	Predicted RBP	11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	CILP2	Q8IUL8	1156 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	PHC2	Q8IXK0	858 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850		Q8N402	240 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	CCL5	P13501	91 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	C6orf132	Q5T0Z8	1188 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	AWAT2	Q6E213	333 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	BRAT1	Q6PJG6	821 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	SPOCK2	Q92563	424 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	DPF1	Q92782	380 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	DIO2	Q92813	273 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	DAZL	Q92904	295 aa	Known RBP	11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	TXNDC15	Q96J42	360 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	CMAHP	Q9Y471	501 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	CDH10	Q9Y6N8	788 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850		A0A1W2PPW3	197 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	MYBPHL	A2RUH7	354 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	CRYM-AS1	A6NIL9	109 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	OXSR1	O95747	527 aa	Predicted RBP	11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	DEFA4	P12838	97 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	ASPA	P45381	313 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	PRKCZ	Q05513	592 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	TPGS2	Q68CL5	300 aa		11.62	□□□□□ -0.55
ABCA2-208	ENST00000459850	MFSD5	Q6N075	450 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms