RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ACPTQ9BZG2 426 aa15.08■□□□□ 0
SNX17-204ENST00000453453 TOR3AQ9H497 397 aa15.08■□□□□ 0
SNX17-204ENST00000453453 SMOC1Q9H4F8 434 aa15.08■□□□□ 0
SNX17-204ENST00000453453 ARMC7Q9H6L4 198 aa15.08■□□□□ 0
SNX17-204ENST00000453453 MAGIXQ9H6Y5 334 aa15.08■□□□□ 0
SNX17-204ENST00000453453 LRTM1Q9HBL6 345 aa15.08■□□□□ 0
SNX17-204ENST00000453453 C1orf109Q9NX04 203 aa15.08■□□□□ 0
SNX17-204ENST00000453453 CABIN1Q9Y6J0 2220 aa15.08■□□□□ 0
SNX17-204ENST00000453453 LSM1O15116 133 aaKnown RBP15.07■□□□□ 0
SNX17-204ENST00000453453 SLC16A6O15403 523 aa15.07■□□□□ 0
SNX17-204ENST00000453453 OR1F1O43749 312 aa15.07■□□□□ 0
SNX17-204ENST00000453453 SEC22BO75396 215 aa15.07■□□□□ 0
SNX17-204ENST00000453453 ZNF883P0CG24 379 aa15.07■□□□□ 0
SNX17-204ENST00000453453 ITGAMP11215 1152 aa15.07■□□□□ 0
SNX17-204ENST00000453453 ZNF24P17028 368 aa15.07■□□□□ 0
SNX17-204ENST00000453453 PCMT1P22061 227 aa15.07■□□□□ 0
SNX17-204ENST00000453453 RAD23AP54725 363 aa15.07■□□□□ 0
SNX17-204ENST00000453453 TPD52P55327 224 aaPredicted RBP15.07■□□□□ 0
SNX17-204ENST00000453453 PPP2R2BQ00005 443 aa15.07■□□□□ 0
SNX17-204ENST00000453453 AP5B1Q2VPB7 878 aa15.07■□□□□ 0
SNX17-204ENST00000453453 PAGE3Q5JUK9 113 aa15.07■□□□□ 0
SNX17-204ENST00000453453 PLA2G2CQ5R387 149 aa15.07■□□□□ 0
SNX17-204ENST00000453453 C6orf136Q5SQH8 315 aa15.07■□□□□ 0
SNX17-204ENST00000453453 PLEKHG7Q6ZR37 379 aa15.07■□□□□ 0
SNX17-204ENST00000453453 Q6ZSR9 355 aa15.07■□□□□ 0
SNX17-204ENST00000453453 ZNF438Q7Z4V0 828 aa15.07■□□□□ 0
SNX17-204ENST00000453453 FAM20CQ8IXL6 584 aa15.07■□□□□ 0
SNX17-204ENST00000453453 FAM181AQ8N9Y4 354 aa15.07■□□□□ 0
SNX17-204ENST00000453453 FNDC5Q8NAU1 212 aa15.07■□□□□ 0
SNX17-204ENST00000453453 ZNF740Q8NDX6 193 aa15.07■□□□□ 0
SNX17-204ENST00000453453 SETD9Q8NE22 299 aa15.07■□□□□ 0
SNX17-204ENST00000453453 DNAJB14Q8TBM8 379 aa15.07■□□□□ 0
SNX17-204ENST00000453453 CHAC2Q8WUX2 184 aa15.07■□□□□ 0
SNX17-204ENST00000453453 VPS33AQ96AX1 596 aa15.07■□□□□ 0
SNX17-204ENST00000453453 NODALQ96S42 347 aa15.07■□□□□ 0
SNX17-204ENST00000453453 MBOAT4Q96T53 435 aa15.07■□□□□ 0
SNX17-204ENST00000453453 CTRCQ99895 268 aa15.07■□□□□ 0
SNX17-204ENST00000453453 IRF2BPLQ9H1B7 796 aa15.07■□□□□ 0
SNX17-204ENST00000453453 ADNPQ9H2P0 1102 aa15.07■□□□□ 0
SNX17-204ENST00000453453 SPNS1Q9H2V7 528 aa15.07■□□□□ 0
SNX17-204ENST00000453453 RHBGQ9H310 441 aa15.07■□□□□ 0
SNX17-204ENST00000453453 MOV10Q9HCE1 1003 aaKnown RBP15.07■□□□□ 0
SNX17-204ENST00000453453 PAK1IP1Q9NWT1 392 aaPredicted RBP15.07■□□□□ 0
SNX17-204ENST00000453453 VPS29Q9UBQ0 182 aa15.07■□□□□ 0
SNX17-204ENST00000453453 WARS2Q9UGM6 360 aaKnown RBP15.07■□□□□ 0
SNX17-204ENST00000453453 C3orf18Q9UK00 162 aa15.07■□□□□ 0
SNX17-204ENST00000453453 POMT2Q9UKY4 750 aa15.07■□□□□ 0
SNX17-204ENST00000453453 ERVK-11Q9UQG0 969 aa15.07■□□□□ 0
SNX17-204ENST00000453453 IGKV1-8A0A0C4DH67 115 aa15.06■□□□□ 0
SNX17-204ENST00000453453 FEZF1A0PJY2 475 aa15.06■□□□□ 0
SNX17-204ENST00000453453 G3V2T6 193 aa15.06■□□□□ 0
SNX17-204ENST00000453453 SIGLEC6O43699 453 aa15.06■□□□□ 0
SNX17-204ENST00000453453 DUX1O43812 170 aa15.06■□□□□ 0
SNX17-204ENST00000453453 GSTT2P0CG29 244 aa15.06■□□□□ 0
SNX17-204ENST00000453453 GSTT2BP0CG30 244 aa15.06■□□□□ 0
SNX17-204ENST00000453453 NCK1P16333 377 aa15.06■□□□□ 0
SNX17-204ENST00000453453 PRPH2P23942 346 aa15.06■□□□□ 0
SNX17-204ENST00000453453 ACVR2AP27037 513 aa15.06■□□□□ 0
SNX17-204ENST00000453453 MAPK1P28482 360 aa15.06■□□□□ 0
SNX17-204ENST00000453453 CD40LGP29965 261 aa15.06■□□□□ 0
SNX17-204ENST00000453453 ALDH4A1P30038 563 aa15.06■□□□□ 0
SNX17-204ENST00000453453 CXCR4P61073 352 aa15.06■□□□□ 0
SNX17-204ENST00000453453 RPS15AP62244 130 aaKnown RBP15.06■□□□□ 0
SNX17-204ENST00000453453 GPLD1P80108 840 aa15.06■□□□□ 0
SNX17-204ENST00000453453 HMGCS1Q01581 520 aa15.06■□□□□ 0
SNX17-204ENST00000453453 ZNF691Q5VV52 312 aa15.06■□□□□ 0
SNX17-204ENST00000453453 ZNF425Q6IV72 752 aa15.06■□□□□ 0
SNX17-204ENST00000453453 FIGLAQ6QHK4 219 aa15.06■□□□□ 0
SNX17-204ENST00000453453 STK32CQ86UX6 486 aa15.06■□□□□ 0
SNX17-204ENST00000453453 EID2Q8N6I1 236 aa15.06■□□□□ 0
SNX17-204ENST00000453453 OR7A2PQ8NGA2 310 aa15.06■□□□□ 0
SNX17-204ENST00000453453 OR6Q1Q8NGQ2 317 aa15.06■□□□□ 0
SNX17-204ENST00000453453 OR2I1PQ8NGU4 316 aa15.06■□□□□ 0
SNX17-204ENST00000453453 OR5K1Q8NHB7 308 aa15.06■□□□□ 0
SNX17-204ENST00000453453 FLVCR1-AS1Q8TAF5 88 aa15.06■□□□□ 0
SNX17-204ENST00000453453 TBC1D20Q96BZ9 403 aa15.06■□□□□ 0
SNX17-204ENST00000453453 CMTM7Q96FZ5 175 aa15.06■□□□□ 0
SNX17-204ENST00000453453 METTL2AQ96IZ6 378 aaKnown RBP15.06■□□□□ 0
SNX17-204ENST00000453453 APOLD1Q96LR9 279 aa15.06■□□□□ 0
SNX17-204ENST00000453453 LRFN3Q9BTN0 628 aa15.06■□□□□ 0
SNX17-204ENST00000453453 DMRT3Q9NQL9 472 aa15.06■□□□□ 0
SNX17-204ENST00000453453 GIMAP2Q9UG22 337 aa15.06■□□□□ 0
SNX17-204ENST00000453453 PPT2Q9UMR5 302 aa15.06■□□□□ 0
SNX17-204ENST00000453453 EIF3LQ9Y262 564 aaKnown RBP15.06■□□□□ 0
SNX17-204ENST00000453453 MAGEB17A8MXT2 336 aa15.06■□□□□ 0
SNX17-204ENST00000453453 SLC1A7O00341 560 aa15.06■□□□□ 0
SNX17-204ENST00000453453 HAT1O14929 419 aa15.06■□□□□ 0
SNX17-204ENST00000453453 TNFSF14O43557 240 aa15.06■□□□□ 0
SNX17-204ENST00000453453 MYO1DO94832 1006 aa15.06■□□□□ 0
SNX17-204ENST00000453453 SCELO95171 688 aa15.06■□□□□ 0
SNX17-204ENST00000453453 HTR1AP08908 422 aa15.06■□□□□ 0
SNX17-204ENST00000453453 PNLIPP16233 465 aa15.06■□□□□ 0
SNX17-204ENST00000453453 MAGP20916 626 aa15.06■□□□□ 0
SNX17-204ENST00000453453 PTX3P26022 381 aaPredicted RBP15.06■□□□□ 0
SNX17-204ENST00000453453 AHRP35869 848 aa15.06■□□□□ 0
SNX17-204ENST00000453453 OR4D2P58180 307 aa15.06■□□□□ 0
SNX17-204ENST00000453453 RPS13P62277 151 aaKnown RBP15.06■□□□□ 0
SNX17-204ENST00000453453 RPL38P63173 70 aaKnown RBP15.06■□□□□ 0
SNX17-204ENST00000453453 PWP1Q13610 501 aa15.06■□□□□ 0
SNX17-204ENST00000453453 CACHD1Q5VU97 1274 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms