RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SYNDIG1LA6NDD5 238 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 FOXE1O00358 373 aaPredicted RBP16.32■□□□□ 0.2
FAM3A-216ENST00000449971 SBK3P0C264 359 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 CD46P15529 392 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 TAC1P20366 129 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 ID2Q02363 134 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 ELAVL1Q15717 326 aaKnown RBP16.32■□□□□ 0.2
FAM3A-216ENST00000449971 ZNF468Q5VIY5 522 aaPredicted RBP16.32■□□□□ 0.2
FAM3A-216ENST00000449971 SPNS3Q6ZMD2 512 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 RPS27LQ71UM5 84 aaKnown RBP16.32■□□□□ 0.2
FAM3A-216ENST00000449971 MILR1Q7Z6M3 343 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 GPR180Q86V85 440 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 OR4N5Q8IXE1 308 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 TMEM151AQ8N4L1 468 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 WDR20Q8TBZ3 569 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 VMP1Q96GC9 406 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 POM121Q96HA1 1249 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 NTMT1Q9BV86 223 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 HES7Q9BYE0 225 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 EPB41L4BQ9H329 900 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 L2HGDHQ9H9P8 463 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 ZBTB26Q9HCK0 441 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 TMEM216Q9P0N5 145 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 LRFN1Q9P244 771 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 PSMC3IPQ9P2W1 217 aaPredicted RBP16.32■□□□□ 0.2
FAM3A-216ENST00000449971 VTI1BQ9UEU0 232 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 TBK1Q9UHD2 729 aa16.32■□□□□ 0.2
FAM3A-216ENST00000449971 A8MT66 165 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 GOLGA8RI6L899 631 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 FCHO1O14526 889 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 ETHE1O95571 254 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 SP1P08047 785 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 CAPN3P20807 821 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 TLX1P31314 330 aaPredicted RBP16.31■□□□□ 0.2
FAM3A-216ENST00000449971 CYB561P49447 251 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 CDH13P55290 713 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 CUL3Q13618 768 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 SERTAD2Q14140 314 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 SGO1Q5FBB7 561 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 C3P1Q6ZMU1 363 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 MEX3BQ6ZN04 569 aaKnown RBP16.31■□□□□ 0.2
FAM3A-216ENST00000449971 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
FAM3A-216ENST00000449971 OR4F6Q8NGB9 312 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 UBLCP1Q8WVY7 318 aaPredicted RBP16.31■□□□□ 0.2
FAM3A-216ENST00000449971 DAZLQ92904 295 aaKnown RBP16.31■□□□□ 0.2
FAM3A-216ENST00000449971 ANKRD9Q96BM1 317 aaPredicted RBP16.31■□□□□ 0.2
FAM3A-216ENST00000449971 SERPINI1Q99574 410 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 RPF2Q9H7B2 306 aaKnown RBP16.31■□□□□ 0.2
FAM3A-216ENST00000449971 MS4A12Q9NXJ0 267 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 PSD3Q9NYI0 1048 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 FETUBQ9UGM5 382 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 PHF11Q9UIL8 331 aa16.31■□□□□ 0.2
FAM3A-216ENST00000449971 PPIEQ9UNP9 301 aaKnown RBP16.31■□□□□ 0.2
FAM3A-216ENST00000449971 NPIPA5E9PKD4 350 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 EEDO75530 441 aaKnown RBP16.3■□□□□ 0.2
FAM3A-216ENST00000449971 ZFAND5O76080 213 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 RPS17P08708 135 aaKnown RBP16.3■□□□□ 0.2
FAM3A-216ENST00000449971 PYGBP11216 843 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 TSPAN8P19075 237 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 BSGP35613 385 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 HLCSP50747 726 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 GPR143P51810 404 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 ARFIP1P53367 373 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 IFT88Q13099 833 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 TRAF3Q13114 568 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 MAPKAPK3Q16644 382 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 KRTAP21-3Q3LHN1 58 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 FRG2Q64ET8 278 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 C18orf63Q68DL7 685 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 SLC25A25Q6KCM7 469 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 CYP20A1Q6UW02 462 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 LCA5Q86VQ0 697 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 ZCCHC7Q8N3Z6 543 aaKnown RBP16.3■□□□□ 0.2
FAM3A-216ENST00000449971 TMEM178AQ8NBL3 297 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 ACMSDQ8TDX5 336 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 ZNF483Q8TF39 744 aaPredicted RBP16.3■□□□□ 0.2
FAM3A-216ENST00000449971 PTPMT1Q8WUK0 201 aaPredicted RBP16.3■□□□□ 0.2
FAM3A-216ENST00000449971 SREK1Q8WXA9 508 aaKnown RBP16.3■□□□□ 0.2
FAM3A-216ENST00000449971 SCMH1Q96GD3 660 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 FRG2BQ96QU4 278 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 OR8D2Q9GZM6 311 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 ZNF223Q9UK11 482 aaPredicted RBP16.3■□□□□ 0.2
FAM3A-216ENST00000449971 NPIPA1Q9UND3 350 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 ATG4BQ9Y4P1 393 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 PCDHGB6Q9Y5F9 930 aa16.3■□□□□ 0.2
FAM3A-216ENST00000449971 C17orf105B2RV13 164 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 PPP6CO00743 305 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 CDK2AP1O14519 115 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 FGF17O60258 216 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 NEURL1O76050 574 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 OTCP00480 354 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 FAM58BPP0C7Q3 252 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 BUD31P41223 144 aaPredicted RBP16.29■□□□□ 0.2
FAM3A-216ENST00000449971 HNRNPH2P55795 449 aaKnown RBP16.29■□□□□ 0.2
FAM3A-216ENST00000449971 GALNTL5Q7Z4T8 443 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 TMEM156Q8N614 296 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 MORN4Q8NDC4 146 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 C7orf57Q8NEG2 295 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 OR14A16Q8NHC5 309 aa16.29■□□□□ 0.2
FAM3A-216ENST00000449971 TRPC4APQ8TEL6 797 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms