RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TGIF2Q9GZN2 237 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 MMADHCQ9H3L0 296 aaPredicted RBP18.14■□□□□ 0.49
RPS28-202ENST00000449223 ABCD2Q9UBJ2 740 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 NDOR1Q9UHB4 597 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 CROTQ9UKG9 612 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 PCDHGA7Q9Y5G6 932 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 PCDHGA3Q9Y5H0 932 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 CNOT1A5YKK6 2376 aaKnown RBP18.14■□□□□ 0.49
RPS28-202ENST00000449223 NUP214P35658 2090 aaPredicted RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 A0A1W2PRB8 838 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 WASHC1A8K0Z3 465 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 GSC2O15499 205 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 FBLP22087 321 aaKnown RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 XCR1P46094 333 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 OR1D4P47884 311 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 HBA1P69905 142 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 IGLV3-21P80748 117 aaPredicted RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 MAT1AQ00266 395 aaKnown RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 ABHD18Q0P651 414 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 C6orf10Q5SRN2 563 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 CPZQ66K79 652 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 ANKRD46Q86W74 232 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 TMPRSS12Q86WS5 348 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 MSRB3Q8IXL7 192 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 CLECL1Q8IZS7 167 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SHISA5Q8N114 240 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 METTL27Q8N6F8 245 aaPredicted RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 SUN3Q8TAQ9 357 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 OR5P2Q8WZ92 322 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 PEX11GQ96HA9 241 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 AMDHD1Q96NU7 426 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 PANX1Q96RD7 426 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 DPH2Q9BQC3 489 aaPredicted RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 B3GNT4Q9C0J1 378 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SLC39A1Q9NY26 324 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 TAS2R9Q9NYW1 312 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 ENTPD4Q9Y227 616 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 MAU2Q9Y6X3 613 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 KNTC1P50748 2209 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 C15orf38-AP3S2A0A0A6YYH1 394 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 PLD2O14939 933 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 DNAJC8O75937 253 aaPredicted RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 GPR75O95800 540 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 FHP07954 510 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SLC6A2P23975 617 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 NTSP30990 170 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 HSD17B7P56937 341 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 PSME3P61289 254 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SYT16Q17RD7 645 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 NKAIN1Q4KMZ8 207 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 DCAF12Q5T6F0 453 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 COX15Q7KZN9 410 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 ARPINQ7Z6K5 226 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SCUBE1Q8IWY4 988 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 DEFB107AQ8IZN7 70 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 ARHGAP24Q8N264 748 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 OR4K14Q8NGD5 310 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 OR8J3Q8NGG0 315 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 TAAR9Q96RI9 348 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 CTRCQ99895 268 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 INPP5KQ9BT40 448 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 CADM1Q9BY67 442 aaKnown RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 ASPSCR1Q9BZE9 553 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 TRIM4Q9C037 500 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SLC7A5P2Q9GIP4 190 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SPAG4Q9NPE6 437 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 MKKSQ9NPJ1 570 aaPredicted RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 LANCL2Q9NS86 450 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SLC22A11Q9NSA0 550 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SLC6A13Q9NSD5 602 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 GIMAP4Q9NUV9 329 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 SLC25A37Q9NYZ2 338 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 VAPAQ9P0L0 249 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 PRPF19Q9UMS4 504 aaKnown RBP18.13■□□□□ 0.49
RPS28-202ENST00000449223 PCDHB14Q9Y5E9 798 aa18.13■□□□□ 0.49
RPS28-202ENST00000449223 PTPRZ1P23471 2315 aaPredicted RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 WDFY3Q8IZQ1 3526 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 A0A1W2PNU3 283 aaPredicted RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 FAM227AF5H4B4 570 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 CLDN4O14493 209 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 FGF17O60258 216 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 CTNSO60931 367 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 ERAL1O75616 437 aaKnown RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 IFI6P09912 130 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 CSNK2A2P19784 350 aaPredicted RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 ITIH1P19827 911 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 MPIP34949 423 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 ETV5P41161 510 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 CDKN2CP42773 168 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 CLDN6P56747 220 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 DCDP81605 110 aaKnown RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 FOLH1Q04609 750 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 BIKQ13323 160 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 COL9A2Q14055 689 aaPredicted RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 ARHGAP40Q5TG30 622 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 ZNF517Q6ZMY9 492 aaPredicted RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 C7orf57Q8NEG2 295 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 ZFP28Q8NHY6 868 aa18.12■□□□□ 0.49
RPS28-202ENST00000449223 WDR36Q8NI36 951 aaKnown RBP18.12■□□□□ 0.49
RPS28-202ENST00000449223 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms