RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SBK2P0C263 348 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 GABRA1P14867 456 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 PPP3CBP16298 524 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 UGT2B7P16662 529 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 ANXA7P20073 488 aaKnown RBP10.28□□□□□ -0.76
LINC00342-202ENST00000448494 ITGA1P56199 1179 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 MTPNP58546 118 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 IL18Q14116 193 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 LRRC32Q14392 662 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 GRIN2CQ14957 1233 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 UBXN2BQ14CS0 331 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 CARD16Q5EG05 197 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 RAET1GQ6H3X3 334 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 OR2T5Q6IEZ7 315 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 FAM122BQ7Z309 247 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 MEIOBQ8N635 442 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 OR2T29Q8NH02 315 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 THAP6Q8TBB0 222 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 DTD1Q8TEA8 209 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 HTR3CQ8WXA8 447 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 CNOT9Q92600 299 aaKnown RBP10.28□□□□□ -0.76
LINC00342-202ENST00000448494 ORAI1Q96D31 301 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 ZBED3Q96IU2 234 aaPredicted RBP10.28□□□□□ -0.76
LINC00342-202ENST00000448494 SPSB2Q99619 263 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 BARD1Q99728 777 aaKnown RBP10.28□□□□□ -0.76
LINC00342-202ENST00000448494 ZNF559Q9BR84 538 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 TINF2Q9BSI4 451 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 DPAGT1Q9H3H5 408 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 NSUN3Q9H649 340 aaKnown RBP10.28□□□□□ -0.76
LINC00342-202ENST00000448494 CPA4Q9UI42 421 aa10.28□□□□□ -0.76
LINC00342-202ENST00000448494 EXO1Q9UQ84 846 aaKnown RBP10.28□□□□□ -0.76
LINC00342-202ENST00000448494 ELOVL7A1L3X0 281 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 GPR31O00270 319 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 SIX6O95475 246 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 C22orf31O95567 290 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 RD3LP0DJH9 198 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 ODC1P11926 461 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 ADRB3P13945 408 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 NPR2P20594 1047 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 NFYAP23511 347 aaPredicted RBP10.27□□□□□ -0.77
LINC00342-202ENST00000448494 EVX1P49640 407 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 FABP9Q0Z7S8 132 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 CAMK2GQ13555 558 aaPredicted RBP10.27□□□□□ -0.77
LINC00342-202ENST00000448494 TDRD10Q5VZ19 366 aaKnown RBP10.27□□□□□ -0.77
LINC00342-202ENST00000448494 LIPJQ5W064 366 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 TGIF2LXQ8IUE1 241 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 SERPINA12Q8IW75 414 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 DCUN1D3Q8IWE4 304 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 SELENOMQ8WWX9 145 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 BRI3BPQ8WY22 251 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 RFT1Q96AA3 541 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 PYURFQ96I23 114 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 ELAC1Q9H777 363 aaKnown RBP10.27□□□□□ -0.77
LINC00342-202ENST00000448494 PRMT7Q9NVM4 692 aaPredicted RBP10.27□□□□□ -0.77
LINC00342-202ENST00000448494 NDUFB11Q9NX14 153 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 PDP1Q9P0J1 537 aaPredicted RBP10.27□□□□□ -0.77
LINC00342-202ENST00000448494 SCN9AQ15858 1988 aa10.27□□□□□ -0.77
LINC00342-202ENST00000448494 BTBD17A6NE02 478 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 SIGLEC5O15389 551 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 OIP5O43482 229 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 AQP8O94778 261 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 HMBSP08397 361 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 F7P08709 466 aaPredicted RBP10.26□□□□□ -0.77
LINC00342-202ENST00000448494 PRR35P0CG20 571 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 S100A11P31949 105 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 RGS19P49795 217 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 SIGLEC14Q08ET2 396 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 FOXO1Q12778 655 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 SMAD4Q13485 552 aaKnown RBP10.26□□□□□ -0.77
LINC00342-202ENST00000448494 PWP1Q13610 501 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 P2RY14Q15391 338 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 HACD4Q5VWC8 232 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 ZNF730Q6ZMV8 503 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 ZFAND4Q86XD8 727 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 XYLT1Q86Y38 959 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 ZDHHC21Q8IVQ6 265 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 MISPQ8IVT2 679 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 OR9Q1Q8NGQ5 310 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 TRMT10AQ8TBZ6 339 aaKnown RBP10.26□□□□□ -0.77
LINC00342-202ENST00000448494 CENPIQ92674 756 aaPredicted RBP10.26□□□□□ -0.77
LINC00342-202ENST00000448494 DMRTA2Q96SC8 542 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 OPN3Q9H1Y3 402 aaPredicted RBP10.26□□□□□ -0.77
LINC00342-202ENST00000448494 AMBNQ9NP70 447 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 NUDT15Q9NV35 164 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 GFOD1Q9NXC2 390 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 TAS2R3Q9NYW6 316 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 WWOXQ9NZC7 414 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 OR6C2Q9NZP2 312 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 WRAP73Q9P2S5 460 aaPredicted RBP10.26□□□□□ -0.77
LINC00342-202ENST00000448494 CHTOPQ9Y3Y2 248 aaKnown RBP10.26□□□□□ -0.77
LINC00342-202ENST00000448494 POLR3HQ9Y535 204 aaPredicted RBP10.26□□□□□ -0.77
LINC00342-202ENST00000448494 MCRIP1C9JLW8 97 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 AZIN1O14977 448 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 SLC16A4O15374 487 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 PRAMEF2O60811 474 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 ICOSLGO75144 302 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 MED6O75586 246 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 AP2A2O94973 939 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 RAB3DO95716 219 aa10.26□□□□□ -0.77
LINC00342-202ENST00000448494 NR2C1P13056 603 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms