RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 WASHC1A8K0Z3 465 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 BTN3A1O00481 513 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 INSIG1O15503 277 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 ORC5O43913 435 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 BNIP3LO60238 219 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 RECQL5O94762 991 aaPredicted RBP12.48□□□□□ -0.41
DDX56-206ENST00000446987 PTBP1P26599 531 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDX56-206ENST00000446987 GRK5P34947 590 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 HERVK_113P63132 956 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 IHHQ14623 411 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 MICAQ29983 383 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 CARD16Q5EG05 197 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 SNX20Q7Z614 316 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 ZFAND4Q86XD8 727 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 HS3ST5Q8IZT8 346 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 PGBD3Q8N328 593 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 DNAAF3Q8N9W5 541 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 TTC29Q8NA56 475 aaPredicted RBP12.48□□□□□ -0.41
DDX56-206ENST00000446987 OR8D1Q8WZ84 308 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 YIPF5Q969M3 257 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 COQ8BQ96D53 544 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 TSGA13Q96PP4 275 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 DPYSL5Q9BPU6 564 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 ERVK-6Q9BXR3 956 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 OR51E2Q9H255 320 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 CARS2Q9HA77 564 aaKnown RBP12.48□□□□□ -0.41
DDX56-206ENST00000446987 FOLH1BQ9HBA9 442 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 RBFOX1Q9NWB1 397 aaKnown RBP12.48□□□□□ -0.41
DDX56-206ENST00000446987 PIH1D1Q9NWS0 290 aaKnown RBP12.48□□□□□ -0.41
DDX56-206ENST00000446987 WSB2Q9NYS7 404 aaPredicted RBP12.48□□□□□ -0.41
DDX56-206ENST00000446987 COPS3Q9UNS2 423 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 ASB4Q9Y574 426 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 PLXNA2O75051 1894 aa12.48□□□□□ -0.41
DDX56-206ENST00000446987 LOC100506127A0A0U1RQW1 187 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 NEMP2A6NFY4 417 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 F8W036 122 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 PIP5K1BO14986 540 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 TNFRSF21O75509 655 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 LEFTY1O75610 366 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 SNAPC5O75971 98 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 CSF3P09919 207 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 CR2P20023 1033 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 CNR2P34972 360 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 MAP2K3P46734 347 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 TAS2R39P59534 338 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 BTG1P62324 171 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 BTN1A1Q13410 526 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 ZNF169Q14929 603 aaPredicted RBP12.47□□□□□ -0.41
DDX56-206ENST00000446987 POM121L1PQ3SYA9 428 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 PLK5Q496M5 336 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 UNC50Q53HI1 259 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 LCN1P1Q5VSP4 162 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 SAXO2Q658L1 398 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 CPZQ66K79 652 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 PMS2CLQ68D20 193 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 ZC3H14Q6PJT7 736 aaKnown RBP12.47□□□□□ -0.41
DDX56-206ENST00000446987 DLEU7Q6UYE1 221 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 LIPIQ6XZB0 460 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 DET1Q7L5Y6 550 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 TMEM179BQ7Z7N9 219 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 TRIM48Q8IWZ4 208 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 TEX26Q8N6G2 289 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 SLC22A8Q8TCC7 542 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 FATE1Q969F0 183 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 FOPNLQ96NB1 174 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 ZNF583Q96ND8 569 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 ZNF599Q96NL3 588 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 LGMNQ99538 433 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 PPIL3Q9H2H8 161 aaKnown RBP12.47□□□□□ -0.41
DDX56-206ENST00000446987 NT5DC2Q9H857 520 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 EMC7Q9NPA0 242 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 DCAF13Q9NV06 445 aaKnown RBP12.47□□□□□ -0.41
DDX56-206ENST00000446987 INTS7Q9NVH2 962 aaKnown RBP12.47□□□□□ -0.41
DDX56-206ENST00000446987 MBD2Q9UBB5 411 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 CPNE7Q9UBL6 633 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 POLG2Q9UHN1 485 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 CMAHPQ9Y471 501 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 LRRK1Q38SD2 2015 aa12.47□□□□□ -0.41
DDX56-206ENST00000446987 A0A0B4J203 849 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 A0A1W2PP55 124 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 CIB4A0PJX0 185 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 PQLC2LA1A4F0 135 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 CLCA1A8K7I4 914 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 KPNA5O15131 536 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 SPINT1O43278 529 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 RNGTTO60942 597 aaKnown RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 WDR47O94967 919 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 ECDO95905 644 aaPredicted RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 BTF3P20290 206 aaKnown RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 PRKAR1BP31321 381 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 ACSL1P33121 698 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 NUP62P37198 522 aaPredicted RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 ALDH9A1P49189 494 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 RORCP51449 518 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 MAP2K6P52564 334 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 RHOAP61586 193 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 PWP1Q13610 501 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 ELOAQ14241 798 aaKnown RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 LPAL2Q16609 132 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 NKG7Q16617 165 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms