RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ARF5P84085 180 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 CSTF1Q05048 431 aaKnown RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 GALEQ14376 348 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 AANATQ16613 207 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 XKR6Q5GH73 641 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 OR52I1Q8NGK6 324 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 HUS1BQ8NHY5 278 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 AP3S1Q92572 193 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 ZC3HAV1LQ96H79 300 aaKnown RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 SENP5Q96HI0 755 aaPredicted RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 AIFM2Q9BRQ8 373 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 ARHGAP39Q9C0H5 1083 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 FZD3Q9NPG1 666 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 ING4Q9UNL4 249 aa13.3□□□□□ -0.28
VPS52-212ENST00000445902 PRG3Q9Y2Y8 225 aaPredicted RBP13.3□□□□□ -0.28
VPS52-212ENST00000445902 LANCL1O43813 399 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 TP53P04637 393 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 PRKACAP17612 351 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 CCR7P32248 378 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 SOAT1P35610 550 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 XKP51811 444 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 PPP3R1P63098 170 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 MRPS6P82932 125 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 CDK6Q00534 326 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 HEPACAMQ14CZ8 416 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 SUZ12Q15022 739 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZMYND11Q15326 602 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 MEX3DQ86XN8 651 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 OR11H7Q8NGC8 314 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 P2RY13Q9BPV8 354 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 TMED9Q9BVK6 235 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 TBC1D17Q9HA65 648 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZFYVE1Q9HBF4 777 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 RDH14Q9HBH5 336 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZFP64Q9NPA5 681 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 THSD1Q9NS62 852 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 REV1Q9UBZ9 1251 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 PCDHB7Q9Y5E2 793 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 ENPP4Q9Y6X5 453 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 RAF1P04049 648 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 HIST1H2AGP0C0S8 130 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 CXCL3P19876 107 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 HIST1H2ADP20671 130 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 PRPH2P23942 346 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 OPRD1P41143 372 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZNF81P51508 661 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 SMSP52788 366 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 MC1RQ01726 317 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 TUSC3Q13454 348 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 EXOSC2Q13868 293 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 MEDAGQ5VYS4 303 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 KIAA1324Q6UXG2 1013 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 LRRC17Q8N6Y2 441 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZNF655Q8N720 491 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZNF366Q8N895 744 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZBTB44Q8NCP5 570 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 KIAA1143Q96AT1 154 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 HIST1H2AHQ96KK5 128 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 HIST1H2AJQ99878 128 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 H2AFJQ9BTM1 129 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 GOLGA4Q13439 2230 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 H3BNC9 293 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 K7ERQ8 282 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 IGLV3-27P01718 113 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 IFNW1P05000 195 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 IRF1P10914 325 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 OSMP13725 252 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 CPEP16870 476 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 IDSP22304 550 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 CD52P31358 61 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 CHI3L1P36222 383 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 CPT1AP50416 773 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 EPHA5P54756 1037 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 RHOAP61586 193 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 SF3A2Q15428 464 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZNF770Q6IQ21 691 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 NCEH1Q6PIU2 408 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 ZNF782Q6ZMW2 699 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 LRRC70Q7Z2Q7 622 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 DDX53Q86TM3 631 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 LSRQ86X29 649 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 POF1BQ8WVV4 589 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 DACT3Q96B18 629 aaPredicted RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 STOML2Q9UJZ1 356 aa13.29□□□□□ -0.28
VPS52-212ENST00000445902 EXO1Q9UQ84 846 aaKnown RBP13.29□□□□□ -0.28
VPS52-212ENST00000445902 GLYATL1P3A0A0U1RQE8 302 aa13.28□□□□□ -0.28
VPS52-212ENST00000445902 SHISA3A0PJX4 238 aa13.28□□□□□ -0.28
VPS52-212ENST00000445902 E7EQ34 232 aa13.28□□□□□ -0.28
VPS52-212ENST00000445902 SAP18O00422 153 aaKnown RBP13.28□□□□□ -0.28
VPS52-212ENST00000445902 SLC30A4O14863 429 aa13.28□□□□□ -0.28
VPS52-212ENST00000445902 NUPL2O15504 423 aaKnown RBP13.28□□□□□ -0.28
VPS52-212ENST00000445902 CD160O95971 181 aa13.28□□□□□ -0.28
VPS52-212ENST00000445902 RECKO95980 971 aa13.28□□□□□ -0.28
VPS52-212ENST00000445902 HLA-DQB1P01920 261 aa13.28□□□□□ -0.28
VPS52-212ENST00000445902 BPIP17213 487 aa13.28□□□□□ -0.28
VPS52-212ENST00000445902 RPS26P62854 115 aaKnown RBP13.28□□□□□ -0.28
VPS52-212ENST00000445902 RAE1P78406 368 aaKnown RBP13.28□□□□□ -0.28
VPS52-212ENST00000445902 BTN1A1Q13410 526 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms